DRSC/TRiP Functional Genomics Resources

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Protein Alignment zyd and Slc24a5

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_038960915.1 Gene:Slc24a5 / 311387 RGDID:1310565 Length:503 Species:Rattus norvegicus


Alignment Length:536 Identity:190/536 - (35%)
Similarity:283/536 - (52%) Gaps:92/536 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NCTQ----PAIDDFPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALNMS 81
            |.||    ||..:||...|::.:...|.:|::.:.:||:|:|:::|||:||:|::|.|..:|.:|
  Rat    43 NSTQCAVSPASSEFPEGFFTKQESTDGGIVIYFLITLYMFMAVSIVCDKYFLPSLEIISDSLGLS 107

  Fly    82 NDVAGATFMAAATSAPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWW 146
            .||||||||||.:|||||....:|.|||:||||:.||:|||::|:|.:.|.||:.:.|...|..|
  Rat   108 QDVAGATFMAAGSSAPELVTAFLGVFITKGDIGISTILGSAIYNLLGICAACGLLSNMVSTLSCW 172

  Fly   147 PLTRDSIAYGVTVAILICVMHDERVEWYEALILVSLYAVYLAVMYFD--------KTFQKCAKGG 203
            ||.||...|.|:|..:..::.|.||.|||..:|:.:|.:|:.::.||        ||.:.|....
  Rat   173 PLFRDCAVYAVSVGAVFGIIFDNRVYWYEGALLLLIYGLYVLLLCFDTTISRYVTKTCRPCCPCL 237

  Fly   204 VKQARSRSRSSNCSIHTKNSNEKEPELVENRICQNMANIQLNGGLNKEQAKATSTSGAGTTAISI 268
            .|....||..     .|....|.|.::...|      ..:.:.|:.:|.      ||....::|:
  Rat   238 AKAMEERSEQ-----QTLLGWENESQIYIRR------QSRTDSGIFQED------SGYSQLSLSL 285

  Fly   269 TTSTMTTTLSTTHSAGGGGGAVGLCSGPGAIVQMAPLDDAEAESHVAVAAADEGRKEEGYSLLSY 333
                        |         ||                   |.|:         |:..|:.|.
  Rat   286 ------------H---------GL-------------------SQVS---------EDPPSVFSM 301

  Fly   334 PKDKSCFAQFTWLIIWPIHLLFRIAIPDCKKAKNNKIFPLTFIMCIVWIGSLSYVVAWMITIIGD 398
            |  ::...:..|::..|:..|..:..|||::......|.:||.|...||.:.:||:.||:||.|:
  Rat   302 P--EADLRRIFWVLSLPVITLLALTTPDCRRKLWKNYFVITFFMSAFWISAFTYVLVWMVTITGE 364

  Fly   399 TLKIPDSVMGITFLAAGTSVPEAVSSVIVAKRGHGSMGICNSIGSNTFDILLCLGVPWLIKAVF- 462
            ||.|||:|||:|.||||||:|:.|:||:||::|.|.|.|.|.:|||.|| :||||:||.||..| 
  Rat   365 TLGIPDTVMGLTLLAAGTSIPDTVASVLVARKGKGDMAISNIVGSNVFD-MLCLGLPWFIKTAFT 428

  Fly   463 ---FPIQPGQNYVAINSAGLEYSAITLLSTLFLLYLTFSTNKFKLDKKVGTACLVMYLVFMVFAS 524
               .||:       :||.||.|..|:|..::|||:|....|.:|||:|:|..|||.||.....:.
  Rat   429 NASAPIE-------VNSKGLTYITISLNISIFLLFLAVHFNGWKLDRKLGVVCLVSYLGLATLSV 486

  Fly   525 LIELNVFFRVNLPTCG 540
            |.||.:.....:..||
  Rat   487 LYELGIIGNNRVRGCG 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 176/487 (36%)
Na_Ca_ex 48..192 CDD:279963 66/143 (46%)
Na_Ca_ex 370..525 CDD:279963 77/158 (49%)
Slc24a5XP_038960915.1 2A1904 <20..>241 CDD:273344 82/197 (42%)
2A1904 <293..493 CDD:273344 90/209 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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