DRSC/TRiP Functional Genomics Resources

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Protein Alignment zyd and Slc24a4

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_742164.2 Gene:Slc24a4 / 238384 MGIID:2447362 Length:622 Species:Mus musculus


Alignment Length:574 Identity:222/574 - (38%)
Similarity:320/574 - (55%) Gaps:86/574 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NCTQPAIDDFPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALNMSNDVA 85
            |||.|||.:||.||||..:||.|||:||::.:||:|.|||:|||::|||::||||..|::|.|||
Mouse    76 NCTDPAIHEFPTDLFSNKERQHGAVLLHILGALYMFYALAIVCDDFFVPSLEKICEKLHLSEDVA 140

  Fly    86 GATFMAAATSAPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWWPLTR 150
            |||||||.:|.||||.:|||.|||.||:||||||||||||||.:...||:.||..:.|.||.:.|
Mouse   141 GATFMAAGSSTPELFASVIGVFITHGDVGVGTIVGSAVFNILCIIGVCGLFAGQVVRLTWWAVCR 205

  Fly   151 DSIAYGVTVAILICVMHDERVEWYEALILVSLYAVYLAVMYFD---KTF----QKCAKGGVKQAR 208
            ||:.|.::|.:||..::||.:.|:|.|:|:.||..|:.:|.::   :||    ||....|...:.
Mouse   206 DSVYYTLSVIVLIAFIYDEEIVWWEGLVLIILYVFYILIMKYNMKMQTFFTTKQKSIANGNPVSN 270

  Fly   209 SRSRSSNC--------------SIHTKNSNEKEPELVENRICQNM--------ANIQLNGGLNKE 251
            .....::.              .:..|....|.|.::.:.|..:.        |.:::       
Mouse   271 ELEDGNDLYDGSYDDPSVPLLGQVKEKPPYGKTPVVMVDEILSSSPPKFTFPEAGLRI------- 328

  Fly   252 QAKATSTSGAGTTAISITTSTMTTTLSTTHSAGGGGGAVGLCSGPGAIVQMAPLDDAEAES---- 312
              ..|:..|..|.....:...:.......:||.|              |...||.:...|:    
Mouse   329 --MITNKFGPRTRLRMASRIIINERQRLINSANG--------------VNSKPLQNGRHENMENG 377

  Fly   313 HVAVAAAD---EGRKEEG----------------YSLLSYPKDKSCFAQFTWLIIWPIHLLFRIA 358
            :|.|...:   :|::::.                .|..|.|:.|...|:  |:..||:..|..:.
Mouse   378 NVPVENPEDPQQGQEQQPPPQPPPPEPESVETVFLSPFSMPEAKGDKAK--WVFTWPLIFLLCVT 440

  Fly   359 IPDCKKAKNNKIFPLTFIMCIVWIGSLSYVVAWMITIIGDTLKIPDSVMGITFLAAGTSVPEAVS 423
            ||:|.|.:..|.|.:|||...:||...||::.|::||||.||.|||.:|||||||||||||:.::
Mouse   441 IPNCSKPRWEKFFMVTFITATLWIAVFSYLMVWLVTIIGYTLGIPDVIMGITFLAAGTSVPDCMA 505

  Fly   424 SVIVAKRGHGSMGICNSIGSNTFDILLCLGVPWLIKAVFFPIQPGQNY---VAINSAGLEYSAIT 485
            |:|||::|.|.|.:.|:||||.||||:.||:||.::.:..      ||   |.|||.||.||.:.
Mouse   506 SLIVARQGLGDMAVSNTIGSNVFDILVGLGIPWGLQTMVI------NYGSTVKINSRGLVYSVVL 564

  Fly   486 LLSTLFLLYLTFSTNKFKLDKKVGTACLVMYLVFMVFASLIELNVFFRVNLPTC 539
            ||.::.|..|....||::||:|:|...||:|.||:.|:.:||.|||..||||.|
Mouse   565 LLGSVALTVLGIHLNKWRLDRKLGIYVLVLYAVFLCFSIMIEFNVFTFVNLPMC 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 194/530 (37%)
Na_Ca_ex 48..192 CDD:279963 80/143 (56%)
Na_Ca_ex 370..525 CDD:279963 77/157 (49%)
Slc24a4NP_742164.2 Na_Ca_ex <80..606 CDD:332332 209/556 (38%)
Alpha-1 139..179 31/39 (79%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 358..408 9/63 (14%)
Alpha-2 495..526 17/30 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834495
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 416 1.000 Inparanoid score I1802
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG50092
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103920
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1775
SonicParanoid 1 1.000 - - X1463
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.840

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