DRSC/TRiP Functional Genomics Resources

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Protein Alignment zyd and Slc24a1

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_659062.1 Gene:Slc24a1 / 214111 MGIID:2384871 Length:1130 Species:Mus musculus


Alignment Length:724 Identity:193/724 - (26%)
Similarity:297/724 - (41%) Gaps:234/724 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DFPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALNMSNDVAGATFMAAA 93
            ::|.||||...|:.|.||||:...:|:|||||:|||||||||:..|...|.:|.||||||||||.
Mouse   406 EYPPDLFSVEDRRQGWVVLHIFGMMYVFVALAIVCDEYFVPALGVITHKLQISEDVAGATFMAAG 470

  Fly    94 TSAPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWWPLTRDSIAYGVT 158
            .||||||.::||.||:..::|:||||||||||||.|...|.:.:...:.|.||||.||...|.:.
Mouse   471 GSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALFSREILNLTWWPLFRDVSFYILD 535

  Fly   159 VAILICVMHDERVEWYEALILVSLYAVYLAVMYFDKTFQ----------------------KCAK 201
            :::||....|..:.|:|:|:|:..||:|:..|.::|..:                      |.::
Mouse   536 LSMLIVFFLDSFIAWWESLLLLLAYALYVFTMKWNKQIELWVKEQLSRRPVAKVMALGDLSKPSE 600

  Fly   202 GGVKQARSRSR------------SSNCSIH---------------------TKNSNEKEPEL-VE 232
            ..|::...:..            ||:.|:|                     .:.|.:|:..| .|
Mouse   601 DAVEENEQQDSKKLKLPSVLTRGSSSASLHNSIIRNTIYHLMLHSLDPLGEARPSKDKQESLNQE 665

  Fly   233 NRI----------------------------------------CQ-NMANIQLNGGLNKEQA-KA 255
            .|:                                        || ::...:..|.:..|:. |.
Mouse   666 ARVLSQTKAESSPDEDEPAELPAVTVTPAPAPDAKGDQEDDPGCQEDVDEAERRGEMTGEEGEKE 730

  Fly   256 TST-------------------------------------------------------------- 258
            |.|                                                              
Mouse   731 TETEGKKDEQEGETEAERKEDEQEEETEAEGKEQEGETEAEGKEDEQEGETEAEGKKDEQEGETE 795

  Fly   259 ---------------------------------------------------------SGAGTTAI 266
                                                                     .|.|.|..
Mouse   796 AEGKEEQEGETEAEGKEDEQEGETEAEGKEEQEGETEAESKEVEQERETEAEGKDKHEGQGETQP 860

  Fly   267 SITT------STMTTTLSTTHSAGGGGGAVGLCSGPGAIVQMAPLDDAEAESHVAVAAADEGRKE 325
            ..|.      .|.........:..|..||.|.....|...:....::.|.|........:|...|
Mouse   861 DDTEVKDGEGETEANAEDQCEATQGEKGADGGGESDGGDSEEEEDEEDEEEEEEEDEEEEEEENE 925

  Fly   326 EGYSLLSYPKDKSCFAQFTWLIIWPIHLLFRIAIPDCKKAKNNKIFPLTFIMCIVWIGSLSYVVA 390
            |..| |.:|..:.  .|..:|.:.||.....:.|||.::.::.|.|.:||:..|:||...||::.
Mouse   926 EPLS-LEWPDSRQ--KQAIYLFLLPIVFPLWLTIPDVRRQESRKFFVITFLGSIIWIAMFSYLMV 987

  Fly   391 WMITIIGDTLKIPDSVMGITFLAAGTSVPEAVSSVIVAKRGHGSMGICNSIGSNTFDILLCLGVP 455
            |....:|:|:.|.:.:||:|.||||||:|:.::|||||::|.|.|.:.:|:|||.|||.:.|.||
Mouse   988 WWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVP 1052

  Fly   456 WLIKAVFFPIQPGQNYVAINSAGLEYSAITLLSTLFLLYLTFS--TNKFKLDKKVGTACLVMYLV 518
            ||:.::...:||    |.::|.|| :.||.|| .|.||::.||  :.|::::|.:|....::|.|
Mouse  1053 WLLFSLINALQP----VPVSSNGL-FCAIVLL-FLMLLFVIFSIASCKWRMNKILGFTMFLLYFV 1111

  Fly   519 FMVFASLIE 527
            |:|.:.::|
Mouse  1112 FLVISVMLE 1120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 183/700 (26%)
Na_Ca_ex 48..192 CDD:279963 73/143 (51%)
Na_Ca_ex 370..525 CDD:279963 64/156 (41%)
Slc24a1NP_659062.1 2A1904 1..1130 CDD:273344 193/724 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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