DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zyd and ncx-5

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_505690.2 Gene:ncx-5 / 191715 WormBaseID:WBGene00003570 Length:656 Species:Caenorhabditis elegans


Alignment Length:577 Identity:189/577 - (32%)
Similarity:277/577 - (48%) Gaps:95/577 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 FPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALNMSNDVAGATFMAAAT 94
            ||.|:||...|:.|.|::|:...:|:||||||||||:|||::..|...|.:|:||||||||||..
 Worm    84 FPADIFSLQTRRRGGVIVHIGLLIYMFVALAVVCDEFFVPSLSVITEVLAISDDVAGATFMAAGG 148

  Fly    95 SAPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWWPLTRDSIAYGVTV 159
            ||||.|.::.|.|:.:.::|||||||||.||||.|.|.|.:.:...:.|.||||.||...|.:::
 Worm   149 SAPEFFTSLFGVFVAQDNVGVGTIVGSATFNILCVLAFCTLFSRQVLHLTWWPLFRDMSFYTLSL 213

  Fly   160 AILICVMHDERVEWYEALILVSLYAVYLAVMYFD-----KT----FQKCAKG------------- 202
            .:|:....||.:||.|||::.|:|..|...|.|:     ||    |:|...|             
 Worm   214 FLLLIFFGDEVIEWQEALVMFSMYIAYGFFMKFNGFLELKTKQFLFRKVGIGSEIAPETIVDAAA 278

  Fly   203 -----------------------GVKQARSR-----------SRSSNCSIHTKNSNEKEPELVEN 233
                                   |.::.|..           :.||:.|..::.||:.:|  |.|
 Worm   279 GCTPRSPHSLGAQGPRRSFPMIHGGQEVRKSIAQLVIGDEDDTSSSSSSSSSERSNKIKP--VSN 341

  Fly   234 ---RICQNMANIQLNGGLNKEQAKATSTSGAGTTAISI------------------TTSTMTTTL 277
               .|.||...|.:... |...||..:.:...|....|                  ......|.|
 Worm   342 GVPEIRQNGRTIMVKPA-NDPDAKFNNQNSIKTVITPIDFGDDHTIVINNNNNGKRKNGNNGTYL 405

  Fly   278 STTHSAGGGGGAVGLCSGPGAIVQMAPLDDAEAESHVAVAAADEGRKEEGYSLLSYPKDKSCFAQ 342
            :...:.....|.:.|....|..|....||:....|..|....|          ||:|  ::...:
 Worm   406 TPVEAINPSNGHLELAQTNGNPVPPIALDNLSIASSTAEKPLD----------LSWP--EANHKK 458

  Fly   343 FTWLIIWPIHLLFRIAIPDCKKAKNNKIFPLTFIMCIVWIGSLSYVVAWMITIIGDTLKIPDSVM 407
            ..:|.:.||.......:||.:|....|.|.:|||..|:||.:.||::.|....||:|..||..:|
 Worm   459 LIYLFLAPITFPLAYTLPDVRKPSLRKFFAITFIGAILWIAAYSYLMVWWANTIGETFGIPTEIM 523

  Fly   408 GITFLAAGTSVPEAVSSVIVAKRGHGSMGICNSIGSNTFDILLCLGVPWLIKAVF--FPIQPGQN 470
            |:|.||||||:|:.::|||||::|.|.|.:.:|||||.||:.:.|.:||||....  |..:|.||
 Worm   524 GLTILAAGTSIPDLITSVIVARKGLGDMAVSSSIGSNLFDVCVGLPIPWLIHFAIGVFKSEPTQN 588

  Fly   471 YVAINSAGLEYSAITLLSTLFLLYLTFSTNKFKLDKKVGTACLVMYLVFMVFASLIE 527
             :::.|.||..|...|.:.|.:|....:.:::|:||..|...:..|..|.:...|:|
 Worm   589 -ISVTSNGLVCSLGLLFAMLIVLLTCVAISRWKMDKFFGLLMIFSYCGFCMLCILLE 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 179/554 (32%)
Na_Ca_ex 48..192 CDD:279963 71/143 (50%)
Na_Ca_ex 370..525 CDD:279963 62/156 (40%)
ncx-5NP_505690.2 Na_Ca_ex 102..244 CDD:279963 70/141 (50%)
Na_Ca_ex 486..642 CDD:279963 62/156 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2929
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.770

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