DRSC/TRiP Functional Genomics Resources

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Protein Alignment zyd and ncx-9

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_504342.2 Gene:ncx-9 / 182576 WormBaseID:WBGene00003574 Length:701 Species:Caenorhabditis elegans


Alignment Length:670 Identity:136/670 - (20%)
Similarity:254/670 - (37%) Gaps:201/670 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 YINCTQPAIDD---FPRDLFSEAQRQSGA-VVLHVIASLY---LFVALAVVCDEYFVPAVEKICA 76
            ||.|.|.:.:.   .....:.:.|...|. |:|.::..||   |||.::.:.|::|.||:..|.:
 Worm    71 YIKCNQDSCEGGGYLTWSHYVKCQYNIGVRVILIILGILYLIILFVIMSSIADDFFCPAISGIVS 135

  Fly    77 ALNMSNDVAGATFMAAATSAPELFVNVIGTFIT---EGDIGVGTIVGSAVFNILAVAACCGIGAG 138
            .|.||..:||.||:|....||::|.::.....|   :.|:.:|.:.|:::|....|.|.......
 Worm   136 HLRMSESIAGVTFLAFGNGAPDVFSSISSVLTTPKPKADLALGDLFGTSIFVTTVVLAIIIFTKS 200

  Fly   139 MTIPLDWWPLTRDSIAYGVTVA-ILICVMHDERVE-WYEALILVSLYAVYLA---VMYFDKTFQK 198
            ..:.:  .|..||.|.|..|:| |:.|.:..:::| |..|..| .:|.||:.   ::...:|.:|
 Worm   201 FKVAI--IPTLRDLIFYMTTLAFIVFCFLKFDKIEVWMPATFL-GIYGVYVVTVIILGIYRTHRK 262

  Fly   199 CAKGGVKQ---------ARSRSRSSNCSIHTKNSNEKEPELVE---------NRICQNMANIQL- 244
              |..:|:         :|..|.:|...|......::|...|.         ::..:|:....| 
 Worm   263 --KRNLKKKNKELEDFLSRPSSAASTTPIFGAMKLKEETISVSALFHFMIGYSQFIKNLTRANLK 325

  Fly   245 -----NGGLNKEQAKATSTSGAG-----TTAISITT----STMTTTLSTTHSAGGGGGAVGLCSG 295
                 |...||.:.:.....|..     .:...|:|    :|..|.|.:..|             
 Worm   326 RTTNNNNNDNKNEKRGIVNLGFSEPYSIPSERKISTIFKQNTFETDLESLES------------- 377

  Fly   296 PGAIVQMAPLDDAEAESHVAVAAADEGRKEE-GYS------------------------------ 329
                  :|.||.::          ||||:|: ||:                              
 Worm   378 ------LADLDGSD----------DEGREEKFGYAHHTVFTSHDQISLVASEIEEIEITTWRSWD 426

  Fly   330 --------LLSYP-----KDKSCFAQFTWLI-IWPIHLLFRIAIPD-----CKK----------- 364
                    |.|:|     .:.:.|.:...:| :.|: ..|::.:|.     ||.           
 Worm   427 WVWDLFNHLKSWPSRDEFSEMNIFIKIVTVIKVVPV-FFFKLTVPSNEMSWCKPLFILHCFASIQ 490

  Fly   365 -----------------------------------------AKNNKIFP-----LTFIMCIVWIG 383
                                                     :|..|.:.     |.|:|.|.||.
 Worm   491 FALFSIQIITLKPFDGSPGLWLYGLGFSAILAMVAMYFLPLSKEQKYYKEIYSYLGFLMSIAWIY 555

  Fly   384 SLSYVVAWMITIIGDTLKIPDSVMGITFLAAGTSVPEAVSSVIVAKRGHGSMGICNSIGSNTFDI 448
            :.|..:..::|:||....:...::|:|.:|....:.:.|:.:.|.|:|:..|.:..:||...|::
 Worm   556 ATSNEIVSVVTMIGVVTGLSMELLGLTIMAWSNCIGDIVADIAVVKQGYPKMAMAAAIGGPLFNL 620

  Fly   449 LLCLGVPWLIKAVFFPIQPGQNYVAINSAG---LEYSAITLLSTLFLLYLTFSTNKFKLDKKVGT 510
            |:..|:|:.|.|.    |..:..:.||...   :.:..|:|::|...|::    .:|.:.:....
 Worm   621 LIGFGLPFTIAAA----QGKEMELLINPVYRLLMLFLGISLVTTFVALFI----QRFTVRRPHAV 677

  Fly   511 ACLVMYLVFMVFASLIELNV 530
            ..:.:::||::|..|.|.:|
 Worm   678 LLIFIFVVFLIFICLAEFHV 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 125/629 (20%)
Na_Ca_ex 48..192 CDD:279963 44/154 (29%)
Na_Ca_ex 370..525 CDD:279963 37/162 (23%)
ncx-9NP_504342.2 PLN03151 68..689 CDD:215604 132/660 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1775
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

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