DRSC/TRiP Functional Genomics Resources

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Protein Alignment zyd and ncx-8

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_504341.1 Gene:ncx-8 / 182575 WormBaseID:WBGene00003573 Length:703 Species:Caenorhabditis elegans


Alignment Length:672 Identity:135/672 - (20%)
Similarity:247/672 - (36%) Gaps:204/672 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 YINCTQPAIDD---FPRDLFSEAQRQSGA----VVLHVIASLYLFVALAVVCDEYFVPAVEKICA 76
            ||.|.|.:.:.   .....:.:.|...||    :::.:|..::|||.::.:.|::|.|::..|..
 Worm    72 YIKCNQDSCEGGGYLTWSHYVKCQYNIGARVVLIIVGIIYLIFLFVVMSTIADDFFCPSISGIVT 136

  Fly    77 ALNMSNDVAGATFMAAATSAPELF---VNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAG 138
            .|.||..:||.||:|....||::|   .:|:.|...:..:.:|.:.|:::|....|.|.......
 Worm   137 HLKMSESIAGVTFLAFGNGAPDVFGSISSVLSTPKPKAALALGDLFGTSIFVTTVVLAIIIFTKS 201

  Fly   139 MTIPLDWWPLTRDSIAYGVTVA-ILICVMHDERVE-WYEALILVSLYAVYLAVMYFDKTFQKCAK 201
            ..:.:  .|..||.|.|.:|:| |..|.:..:::| |..|..| .:|||||..:.....::...|
 Worm   202 FKVAI--IPTLRDLIFYMITLAFITFCFLKFDKIEVWMPATFL-GIYAVYLLTVIAFSIYRTRRK 263

  Fly   202 GGVKQ-------------ARSRSRSSNCSIHTKNSNEKEPELVE-------------------NR 234
            ...|:             :|..|.:||..|..|...:.|...|.                   |:
 Worm   264 NLKKKKQLESEKDDESAISRPESVASNMPICEKLEKKTESMSVSTLFHVMVGLSRFMKKLNRTNK 328

  Fly   235 ICQNMANIQ---LNGGLNKEQAKATSTSGAGTTAISI--TTSTMTTTLSTTHSAGGGGGAVGLCS 294
            | |::.|.:   :|.|.: |...|...:......||:  ...|:.|.|.:               
 Worm   329 I-QSIENKKQGFVNEGFS-ESLDADELTLKRNRMISLIFRNKTLDTDLES--------------- 376

  Fly   295 GPGAIVQMAPLDDAEAESHVAVAAADEGRKEEG-------------------------------- 327
                   |..||:.|:..       ||||:||.                                
 Worm   377 -------MKTLDEMESSD-------DEGREEEFAYAHHTVFTSHDQMSLAATEFEFRELTTWRSR 427

  Fly   328 -------YSLLSYPKDKS-----------------------------------------CFAQFT 344
                   |.|..:|..:.                                         |||...
 Worm   428 DWIIDLLYHLKPWPSREEFSEMNIFVKIIMIIRIIPSFFMKMTIPSNEMSWCKPLFLLHCFASIQ 492

  Fly   345 WLI----------------IWPIHLLFRIAI--------PDCKKAKNNK-IFP-LTFIMCIVWIG 383
            :.:                :|...|.|...|        |..|:.|.:| ::. |.|:|.|.||.
 Worm   493 FALFSIQIINLKPFDGSPGLWLYGLAFSATIALLALCFLPLNKELKYHKEVYSYLGFLMSIAWIY 557

  Fly   384 SLSYVVAWMITIIGDTLKIPDSVMGITFLAAGTSVPEAVSSVIVAKRGHGSMGICNSIGSNTFDI 448
            :.:..:..::|::|....:...::|:|.::....:.:.|:.:.|.|:|:..|.:..:||...|::
 Worm   558 ATANEIISVMTMVGVVTGLSQELLGLTVMSWSDCIGDIVADIAVIKQGYPKMAMAAAIGGPLFNL 622

  Fly   449 LLCLGVPWLI-----KAVFFPIQPGQNYVAINSAGLEYSAITLLSTLFLLYLTFSTNKFKLDKKV 508
            |:..|:|:.|     |.:...|.|....:      |.:..|:|::|...|::    .:|.:....
 Worm   623 LIGFGLPFTIASAQGKQIDLIINPVYRIL------LLFLGISLVTTFVALFI----ERFTVRWPH 677

  Fly   509 GTACLVMYLVFMVFASLIELNV 530
            ..|.:.:::.|::|..|.|.:|
 Worm   678 AVALIFIFINFVIFVCLAEFHV 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 124/628 (20%)
Na_Ca_ex 48..192 CDD:279963 44/148 (30%)
Na_Ca_ex 370..525 CDD:279963 34/160 (21%)
ncx-8NP_504341.1 PLN03151 61..628 CDD:215604 117/589 (20%)
Na_Ca_ex 107..253 CDD:279963 44/148 (30%)
Na_Ca_ex 544..681 CDD:279963 31/146 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1775
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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