DRSC/TRiP Functional Genomics Resources

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Protein Alignment zyd and ncx-6

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_499146.2 Gene:ncx-6 / 182354 WormBaseID:WBGene00003571 Length:590 Species:Caenorhabditis elegans


Alignment Length:583 Identity:126/583 - (21%)
Similarity:222/583 - (38%) Gaps:151/583 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 HILLFCYINC-TQPAIDDFPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICA 76
            ::|...|:.| :.||:    |.:.         ::..||..|.||:.::...|::|.|::..|.|
 Worm    80 YVLWTRYVECASSPAV----RIIL---------IITGVIYMLVLFIMVSSAADDFFSPSISSIVA 131

  Fly    77 ALNMSNDVAGATFMAAATSAPELF---VNVIGTFITEGDIGVGTIVGSAVF---NILAVAACCGI 135
            .|.:|..|||.||||....||::|   .:|:.:...:.|:.:|.:.|:.:|   .:|||..    
 Worm   132 HLRISESVAGVTFMAFGNGAPDVFGAIASVLSSPTPKADLALGELFGAGLFVTTMVLAVTI---- 192

  Fly   136 GAGMTIPL--DWWPLTRDSIAYGVTVAIL-ICVMHDERVEWYEALILVSLYAVYLAVMYFDKTFQ 197
               .|.|.  :.:...||...|.|.:|.| .|.::.:.||.:..:..:.:|.:|:..:...:...
 Worm   193 ---FTRPFKAEVFSSIRDIAFYLVALAFLAFCFVYYDHVEIWMPITFLGVYLIYVCTVILSQILH 254

  Fly   198 KCAK------GGVKQARSRSRSSNCSIHTKNSN-----------EKEPELVENRICQNMANIQLN 245
            ...|      ..||...:.|...:..|:..:.:           |.|.|.||     .:......
 Worm   255 NRHKKDEEKVDEVKTVDTDSLEDDDDIYVSHGHHVLHAHEVMKMEAEIEAVE-----PLKTWSFR 314

  Fly   246 GGLN--KEQAKATSTSG--------AGTTAISITTSTMTTTLSTTHSAGGGGGAVGL-------- 292
            |.::  ||..|...:..        ....|:..|.......|:..||.......:.|        
 Worm   315 GVVHDFKEHLKPWPSMDEWDEMNIFQKVIAVLNTIPNFLFKLTIPHSEQPWSKPITLLQCLICPV 379

  Fly   293 --------CS------GPG----AIVQMAPLDDAEAESHVAVAAADEGRKEEGY--SLLSYPKDK 337
                    ||      .||    .::....|.       .||....|..||..:  ||:||    
 Worm   380 FLLFCIQVCSISPFPNSPGLWMYGLILSVLLT-------AAVLFFTELHKEPPFYKSLISY---- 433

  Fly   338 SCFAQFTWLIIWPIHLLFRIAIPDCKKAKNNKIFPLTFIMCIVWIGSLSYVVAWMITIIGDTLKI 402
                                               ..|:|.|.||..:|..|..::|::|...::
 Worm   434 -----------------------------------AGFLMSIAWIYLISSEVVNVVTMLGVVSRV 463

  Fly   403 PDSVMGITFLAAGTSVPEAVSSVIVAKRGHGSMGICNSIGSNTFDILLCLGVPWLI-----KAVF 462
            ...|:|:|.||...|:.:.::.|.|||:|:..|.:..:||...|::|:..|:|:.|     |::.
 Worm   464 SHEVLGLTILAWSNSIGDLIADVSVAKQGYPRMAMAAAIGGQLFNLLIGFGLPFTIAKIQGKSIS 528

  Fly   463 FPIQPGQNYVAINSAGLEYSAITLLSTLFLLYLTFSTNKFKLDKKVGTACLVMYLVFMVFASL 525
            ..|.|....:.:      :.||:|:.||..::    ..|:.|.:....:.:.:|:.|.||..|
 Worm   529 MIINPTYRLLML------FLAISLIFTLIAMF----AQKYFLRRIHSYSLVFIYISFFVFIGL 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 117/544 (22%)
Na_Ca_ex 48..192 CDD:279963 43/152 (28%)
Na_Ca_ex 370..525 CDD:279963 42/159 (26%)
ncx-6NP_499146.2 Na_Ca_ex 105..249 CDD:279963 42/150 (28%)
Na_Ca_ex 431..579 CDD:279963 43/196 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1775
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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