DRSC/TRiP Functional Genomics Resources

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Protein Alignment zyd and slc24a4b

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_002665845.2 Gene:slc24a4b / 100334346 ZFINID:ZDB-GENE-081031-75 Length:636 Species:Danio rerio


Alignment Length:558 Identity:236/558 - (42%)
Similarity:318/558 - (56%) Gaps:92/558 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NCTQPAIDDFPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALNMSNDVA 85
            |||:|||.:||.|:|:.|:|:||||:||:||:||:|:|||:|||:|||.::||||..||:|.|||
Zfish   129 NCTEPAIHEFPDDVFTNAERKSGAVLLHIIAALYMFLALAIVCDDYFVTSLEKICEKLNLSEDVA 193

  Fly    86 GATFMAAATSAPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWWPLTR 150
            |||||||.:||||||.:|||.|||.||:||||||||||||||.:...|||.||..:.|.||.:.|
Zfish   194 GATFMAAGSSAPELFASVIGVFITHGDVGVGTIVGSAVFNILCIIGVCGIFAGQVVLLTWWAVFR 258

  Fly   151 DSIAYGVTVAILICVMHDERVEWYEALILVSLYAVYLAVMYFDKTFQKCAKGGVKQARSRSRSSN 215
            ||..|.::|..||..::||::.|:|:|:||.:||.|:.:|.|:...||                 
Zfish   259 DSFFYILSVVALIVFIYDEKIVWWESLVLVVMYACYILIMKFNSRLQK----------------- 306

  Fly   216 CSIHTKNSNEKEPELVENRICQNMANIQLNGGLNKEQAKATSTSGAGTTAI---SITTSTMT--- 274
              ..|:..|            :|:||.....|...|..|.:.....|:..:   .|..|...   
Zfish   307 --FFTRKGN------------KNVANGNAAAGSELEDVKTSKIYSRGSVVMVDEIINASPPNYRF 357

  Fly   275 -----TTLSTTHSAGGGGGAVGLCSGPGAIVQMAP-LDDAEAESHVAVA-----AADEGRK--EE 326
                 ..:.|.|            .||...::||. |...|.:..|..|     |..:|:.  |.
Zfish   358 PEAGLRVMVTNH------------FGPKTRLRMASRLIITERQRLVQSANGVETAVVDGKPDIEN 410

  Fly   327 GYSLLSYPKDKS-----------------CFAQFTWLIIWPIHLLFRIAIPDCKKAKNNKIFPLT 374
            |    :.|:|||                 |..:..|||.||:.|:....||:|.|::..|.|.|:
Zfish   411 G----NVPEDKSTEEKESELTTPFRLPDGCMNRTKWLISWPLLLILFFTIPNCAKSRWEKYFMLS 471

  Fly   375 FIMCIVWIGSLSYVVAWMITIIGDTLKIPDSVMGITFLAAGTSVPEAVSSVIVAKRGHGSMGICN 439
            ||:..|||...||.:.||:||||.||.|||.:|||||||||||||:.::|:|||::|.|.|.:.|
Zfish   472 FILSTVWIAVFSYFMVWMVTIIGYTLGIPDVIMGITFLAAGTSVPDCIASLIVARQGLGDMAVSN 536

  Fly   440 SIGSNTFDILLCLGVPWLIKAVFFPIQPGQNY---VAINSAGLEYSAITLLSTLFLLYLTFSTNK 501
            :||||.||||:.|||||.::.:      ..||   |.|||.||.||.:.||.::.|..|....|.
Zfish   537 TIGSNVFDILVGLGVPWALQTM------AVNYGSVVMINSRGLLYSVVLLLGSVALTILGIHLNH 595

  Fly   502 FKLDKKVGTACLVMYLVFMVFASLIELNVFFRVNLPTC 539
            :|||.|:|...|::|.||:.|:.:||.|||..||||.|
Zfish   596 WKLDFKLGVYVLLLYAVFLCFSIMIEYNVFTFVNLPMC 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 209/514 (41%)
Na_Ca_ex 48..192 CDD:279963 86/143 (60%)
Na_Ca_ex 370..525 CDD:279963 79/157 (50%)
slc24a4bXP_002665845.2 TIGR00367 155..581 CDD:273039 195/478 (41%)
Na_Ca_ex 156..298 CDD:279963 85/141 (60%)
Na_Ca_ex 467..619 CDD:279963 79/157 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577432
Domainoid 1 1.000 187 1.000 Domainoid score I3263
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 407 1.000 Inparanoid score I1859
OMA 1 1.010 - - QHG50092
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 1 1.000 - - otm25347
orthoMCL 1 0.900 - - OOG6_103920
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1775
SonicParanoid 1 1.000 - - X1463
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.840

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