DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17167 and Slc24a3

DIOPT Version :9

Sequence 1:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_445957.2 Gene:Slc24a3 / 85267 RGDID:69256 Length:642 Species:Rattus norvegicus


Alignment Length:595 Identity:171/595 - (28%)
Similarity:277/595 - (46%) Gaps:134/595 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 TVTQAKAATSNASSFLEVSLRYFDEQLLLDILPRAQCPGEDEGSPMDEFADLFTVDQLRQGWVVL 85
            |:|...|...::.:..|.:|..|         ||                |:|:.:..|||.|||
  Rat    72 TLTSEDAGLRSSKNCTEPALHEF---------PR----------------DIFSNEDRRQGAVVL 111

  Fly    86 HVFAAVYFFILLAIICNDYFLPTVECICEDLHLSKDVAAATFMATATSMPEFFTNTISTLILESD 150
            ||..|:|.|..|||:|:|:|:|::|.|||.||||:|||.|||||..:|.||.||:.|...|.:.|
  Rat   112 HVLCAMYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTSVIGVFITKGD 176

  Fly   151 MGLGTIIGSLMFNTLGVAGLAALAIDKPVQLDWWPIARDCFIYVFNTIILLVLAWSGSISFTESC 215
            :|:|||:||.:||.|.:.|:..|...:.|.|..|.:.||...|..:.:.|:|..:...:|:.||.
  Rat   177 VGVGTIVGSAVFNILCIIGVCGLFAGQVVALSSWCLLRDSIYYTLSVVALIVFIYDEKVSWWESL 241

  Fly   216 IMMGFLILYYLITFNNNKFMPAI--------------------RVFIEDRMNC------------ 248
            :    |:|.|||.....|:...|                    ...|:|..||            
  Rat   242 V----LVLMYLIYIIIMKYNACIHQCFERRTKGAGNMVNGLANNAEIDDSSNCDATVVLLKKANF 302

  Fly   249 --------------------CFS---TRYDLTE--PPE---NSAKAQLPLKKDPL-------SGD 278
                                .||   .|..:|.  ||:   :.|...|..::..|       :|:
  Rat   303 HRKASVIMVDELLSAYPHQLSFSEAGLRIMITSHFPPKTRLSMASRMLINERQRLINSRAYTNGE 367

  Fly   279 GLFVLNLP-----ENTSSMSST----ANLTR--------------------NKHLNDEDDVADVV 314
            ....:.:|     ||.:..||.    .|.||                    |::..:||:..|..
  Rat   368 SEVAIKIPIKHTVENGTGPSSAPDRGVNGTRRDDIVAEADNETENENEDENNENDEEEDEDDDEG 432

  Fly   315 PGSIYAYPRDASGWMQ-FWWIFVFPIKVTLSLLIPHPMK--YRRLYPLSFIMCILCIGGNAYLIV 376
            |.:.:..|   ||.:: ..|.|.:|:...|...:|:..|  :.:.:.::|....|.|...:|::|
  Rat   433 PYTPFDPP---SGKLETVKWAFTWPLSFVLYFTVPNCNKPHWEKWFMVTFASSTLWIAAFSYMMV 494

  Fly   377 WMLTAFGVAIHVPTIVMGLTFLAAGSTMPEAVSSLISLRNGENGIGVSNSLGANSLAILLSLGVP 441
            ||:|..|..:.:|.::||:||||||:::|:.::|||..|.|...:.||||:|:|...||:.||:|
  Rat   495 WMVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGMGDMAVSNSIGSNVFDILIGLGLP 559

  Fly   442 WFIKN-CIHYGTGEPQQVGTQGIEYNILILIISTMALFIILSFSGYRLTKRVGVALFTVYGVFIV 505
            |.::. .:.||:  ..::.::|:.|::.:|:.|.......:..:.::|.|::|.....:||||:.
  Rat   560 WALQTLAVDYGS--YIRLNSRGLIYSVGLLLASVFVTVFGVHLNKWQLDKKLGCGCLFLYGVFLC 622

  Fly   506 LQILIEMNVF 515
            ..|:.|.|||
  Rat   623 FSIMTEFNVF 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17167NP_001015257.2 TIGR00367 85..503 CDD:273039 149/517 (29%)
Na_Ca_ex 86..229 CDD:279963 63/142 (44%)
Na_Ca_ex 356..509 CDD:279963 49/153 (32%)
Slc24a3NP_445957.2 TIGR00367 111..604 CDD:273039 144/501 (29%)
Na_Ca_ex 112..254 CDD:279963 63/145 (43%)
Na_Ca_ex 474..626 CDD:279963 49/153 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338074
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.950

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