DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17167 and CCX4

DIOPT Version :9

Sequence 1:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_564650.1 Gene:CCX4 / 841851 AraportID:AT1G54115 Length:644 Species:Arabidopsis thaliana


Alignment Length:522 Identity:108/522 - (20%)
Similarity:208/522 - (39%) Gaps:101/522 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 GWVVLHVFAAVYFFILLAIICNDYFLPTVECICEDLHLSKDVAAATFMATATSMPEFFTNTISTL 145
            |:::|.|:....|: ||.....|||..::|.:.:.|.|...||..|.:......|:.|. :|:..
plant   136 GYILLGVWLVALFY-LLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFA-SIAAF 198

  Fly   146 I--LESDMGLGTIIGSLMFNTLGVAGLAALAI-DKPVQLDWWPIARDCFIYVFNTIILLVLAWSG 207
            :  .:.::||.:::|..:|.|..|.|:.:|.: ||.|::|.....||...::|..:.|:|:...|
plant   199 VGSDKGEVGLNSVLGGAVFVTCVVVGIVSLCVADKEVKIDKKCFIRDLSFFLFTLVALMVILMVG 263

  Fly   208 SISFTESCIMMGFLILYYLITFNNNKFMPAIRVFIEDRMNCCFSTRYDLTEPPENSAKAQLPLKK 272
            .::...:...:...:.|..:...|.......|....|.:......:..:...|  |.:..:|: .
plant   264 KVTVGIAIAFVSIYVFYASLVAANEILRKHSRRLKLDSITPLLPMQGSVFSSP--SVEEDIPM-Y 325

  Fly   273 DPL----SGDGLFVL--NLPE--NTSSMSSTANLTRNKHLNDE--------DDVADV-------- 313
            .||    :|:|...|  :||:  ..::::..:|.....:::||        :|.|:|        
plant   326 SPLMELDTGEGPPRLHDSLPQWMWATNVAIYSNHFAKANVHDEERPPWGWTEDGAEVESSLCSKI 390

  Fly   314 ---------VPGSIYAYPRDASGW---------------MQFWW-----------IFVFPIKVTL 343
                     ||..:.....:...|               :.|.|           |..:.|.:.:
plant   391 TSLLETPLTVPRRLTIPLIEEDSWSKTYAVASVSLAPVLLSFLWSSQDDTSLQARIVAYFIGIAI 455

  Fly   344 SLLIPH-------PMKYRRLYPLSFIMCILCIGGNAYLIVW----------MLTAFGVAIHVPTI 391
            ...:.:       |.:..::|.:.::     :||....|||          :|..||....:...
plant   456 GSTLGYLAFKNTEPDRPPQIYLIPWV-----LGGFIMSIVWFYMIANELVALLVTFGGIYGINPS 515

  Fly   392 VMGLTFLAAGSTMPEAVSSLISLRNGENG--IGVSNSLGANSLAILLSLGVPWFI----KNCIHY 450
            ::|||.||.|::|.:.||::....||.:|  |.:|..........|:.||:..|:    |:...|
plant   516 ILGLTVLAWGNSMGDLVSNIALSMNGGDGVQIALSGCYAGPMFNTLVGLGMSMFLGAWSKSPETY 580

  Fly   451 GTGEPQQVGTQGIEYNILILIISTMALFIILSFSGYRLTKRVGVALFTVYGVFIVLQILIEMNVF 515
            ...|     ...:.|.:..||...:...::|..:..|..|.:|:.|.|:|.:|:..::...|. |
plant   581 MIPE-----DNSLFYTLGFLIFGLIWSLVMLPRNEMRPNKVMGIGLITLYLIFVTFRLSSAMG-F 639

  Fly   516 FP 517
            .|
plant   640 IP 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17167NP_001015257.2 TIGR00367 85..503 CDD:273039 103/502 (21%)
Na_Ca_ex 86..229 CDD:279963 35/145 (24%)
Na_Ca_ex 356..509 CDD:279963 41/168 (24%)
CCX4NP_564650.1 PLN03151 1..644 CDD:215604 108/522 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 70 1.000 Domainoid score I3391
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I1830
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

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