DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17167 and CAX11

DIOPT Version :9

Sequence 1:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_172370.3 Gene:CAX11 / 837416 AraportID:AT1G08960 Length:546 Species:Arabidopsis thaliana


Alignment Length:560 Identity:115/560 - (20%)
Similarity:224/560 - (40%) Gaps:101/560 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LFFTLCGSFLTVTQAKAATSNASSFLEVSLRYF--DEQLLLD----ILPRAQC---PGEDEGSPM 66
            :||     |||       |:...:|.:..||..  |.|:..:    :.|::.|   ...|.|..:
plant    23 IFF-----FLT-------TTTIPTFPDHPLRSLLDDSQITTNSSSIVNPKSSCVSSRSHDNGGVI 75

  Fly    67 DEFADLFTV--DQLRQGWVVLHVFAAVYFFILLAIICNDYFLPTVECICEDLHLSKDVAAATFMA 129
            :.|:..:.:  :.|.....:|.:...::|:||:. ....:|......:.:.|:||..:||.|.:|
plant    76 NYFSLHYCIFNENLFFSIPILSLLILLHFYILIK-TAQTHFSTVTTKLADRLNLSPSMAAVTLLA 139

  Fly   130 TATSMPEFFTNTISTLILESDMGLGTIIGSLMFNTLGVAGLAALAIDKPVQLDWWPIARDCFIYV 194
            .....|:.|.:..:....:...|.|.|:.:..|.:..|.|..|: ...|..:|.....||...|:
plant   140 LGNGAPDVFASVAALRGGQYRTGFGAILSAGTFVSAFVVGFVAI-YAAPFPVDAASFVRDVLFYL 203

  Fly   195 FNTIILLVLAWSGSISFTESCIMMGFLILY----YLITFNNNKFMPAIRVFIED-----RMNCCF 250
            ...:.|..:..||.|...::...:||.|.:    :.:.|..|  :...:...|:     |:..| 
plant   204 IAALFLFYVYLSGEIFVWQAIGFVGFYIFFVGFVFWMDFGTN--VEKGKSISEEEKDLLRLQDC- 265

  Fly   251 STRYDLTEPPENSAKAQLPLKKDPLSGDGLF----------------VLNL------PENTSSMS 293
                ::......|.||:   |:...|  |:|                :|||      |...|...
plant   266 ----EIAAGSLGSYKAE---KEHQFS--GIFRLYGTISRMWETPVSVLLNLTIPKPSPSEWSRFY 321

  Fly   294 STANL---------TRNKHLNDEDDVADVVPGSIYAYPRDASGWMQFWWIFVFPIKVTLSLLIPH 349
            .:||:         |.|..:.....::.:.|.:          .:..|.:.:|   :|.||...|
plant   322 RSANIVFCPFALLYTCNSFVQLNHPISFLFPNT----------HLPLWLVVLF---MTSSLAFLH 373

  Fly   350 ------PMKYRRL--YPLSFIMCILCIGGNAYLIVWMLTAFGVAIHVPTIVMGLTFLAAGSTMPE 406
                  |.|..:|  ..::|||.:..|...|..::..|.|.|..:.:|..::|||.||.|:::.:
plant   374 FTVEKQPPKTEQLPVIVVAFIMSVFWISTIAGELLNCLAALGTLLKLPPALLGLTVLAWGNSVGD 438

  Fly   407 AVSSLISLRNGENGIGVSNSLGANSLAILLSLGVPWFIKNCIHYGTGEPQQVGTQ-GIEYNILIL 470
            .|:.:...:.|...:.::.........:|:.||....::....|  .:..::|.. ||....:.|
plant   439 LVADVAVAKAGRPAMAMAGCFAGPMFNMLVGLGSALVMQTANVY--PDAYKLGFHVGIVIAFVFL 501

  Fly   471 IISTMALFIILSFSGYRLTKRVGVALFTVYGVFIVLQILI 510
            ::|.|...:::::|.:|:.:..|:.|..:|..|..:.::|
plant   502 LLSLMGSLLVITWSRFRVPRFWGICLVGLYVAFTFVSLII 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17167NP_001015257.2 TIGR00367 85..503 CDD:273039 96/466 (21%)
Na_Ca_ex 86..229 CDD:279963 32/146 (22%)
Na_Ca_ex 356..509 CDD:279963 34/155 (22%)
CAX11NP_172370.3 PLN03151 72..539 CDD:215604 100/495 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 70 1.000 Domainoid score I3391
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I1830
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

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