DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17167 and CAX9

DIOPT Version :9

Sequence 1:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_566474.1 Gene:CAX9 / 820622 AraportID:AT3G14070 Length:643 Species:Arabidopsis thaliana


Alignment Length:540 Identity:118/540 - (21%)
Similarity:209/540 - (38%) Gaps:139/540 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 GWVVLHVFAAVYFFILLAIICNDYFLPTVECICEDLHLSKDVAAATFMATATSMPEFFTNTISTL 145
            |:::|.|:....|: ||.....|||..::|.:.:.|.|...||..|.:......|:.|.:..:.:
plant   137 GYMMLGVWLVALFY-LLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFV 200

  Fly   146 ILE-SDMGLGTIIGSLMFNTLGVAGLAALAI-DKPVQLDWWPIARDCFI-----YVFNTIILLVL 203
            ..: .::||.:::|..:|.|..|.|:.:|.: ||.|::|     ::|||     ::|:.:.|||:
plant   201 GTDKGEVGLNSVLGGAVFVTSVVVGIVSLCVADKEVKID-----KNCFIRDLSFFLFSLVSLLVI 260

  Fly   204 AWSG------SISFTESCIMMGFLI-----------------LYYLITFNNNKFMPAIRVFIEDR 245
            ...|      :|:|....::..||:                 |..|:....:.|.|::.   ||.
plant   261 LMVGRVTVRIAIAFVSIYVVYAFLVAANVILRKHAKRFKLEALTPLLPMQGSVFSPSVG---EDM 322

  Fly   246 -MNCCFSTRYDLTEPPENSAKAQLPLKKDPLSGDGLFVLNLPE--NTSSMSSTANLTRNKHLNDE 307
             ||    |....||..:...:.|                :||:  ..|:::..:|......::||
plant   323 PMN----TPLIETETEDGPPRLQ----------------SLPQWMWASNVAIYSNHFAKVSVHDE 367

  Fly   308 --------DDVADVVPGSIYAY----------PR-------DASGWMQ----------------F 331
                    ||.|:|...|...:          ||       :...|.:                .
plant   368 DRPPWGWIDDTAEVESSSCTKFTSLLEIPLTIPRRLTIPSVEEDTWSKTYAVASVSLAPVLLASL 432

  Fly   332 W--------------WIFVFPIKVTLSLLI------PHPMKYRRLYPL---SFIMCILCIGGNAY 373
            |              :.|...|..||..|.      .||.: |.|.|.   .|||.|:.....|.
plant   433 WSSQDDVSLQACGVAYFFSVVIGSTLGFLAYKNTEPDHPPR-RFLIPWVLGGFIMSIVWFYMIAN 496

  Fly   374 LIVWMLTAFGVAIHVPTIVMGLTFLAAGSTMPEAVSSLISLRNGENG--IGVSNSLGANSLAILL 436
            .:|.:|..||....:...::.||.||.|::|.:.||::....||.:|  |.:|..........|:
plant   497 ELVALLVTFGEIYGINPSILALTVLAWGNSMGDLVSNIALTMNGGDGVQIALSGCYAGPMFNTLV 561

  Fly   437 SLGVPWFI----KNCIHYGTGEPQQVGTQGIEYNILILIISTMALFIILSFSGYRLTKRVGVALF 497
            .||:....    |:...|...|     .:.:.|.:..|::..:...:||..:..:.::.:||.|.
plant   562 GLGMSMLFGAWSKSPDTYMLPE-----DKSLFYTLGFLVLGLVWAMVILPRNDMQPSRTLGVGLI 621

  Fly   498 TVYGVFIVLQILIEMNVFFP 517
            .:|.:|:..::...|. |.|
plant   622 AIYLIFVTFRLSCAMG-FIP 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17167NP_001015257.2 TIGR00367 85..503 CDD:273039 113/520 (22%)
Na_Ca_ex 86..229 CDD:279963 41/172 (24%)
Na_Ca_ex 356..509 CDD:279963 39/161 (24%)
CAX9NP_566474.1 PLN03151 1..643 CDD:215604 118/540 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 70 1.000 Domainoid score I3391
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I1830
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

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