DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17167 and slc24a6a

DIOPT Version :9

Sequence 1:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_009289475.1 Gene:slc24a6a / 561209 ZFINID:ZDB-GENE-100922-39 Length:639 Species:Danio rerio


Alignment Length:647 Identity:175/647 - (27%)
Similarity:286/647 - (44%) Gaps:162/647 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 WRCLFFTLCGS-----------------FLTVTQAKAAT-----------SNASSFLEVSLRYFD 44
            |||  |..||.                 |:......|.|           |...|....:.|...
Zfish    10 WRC--FKRCGGGMKAVLTSRRQRLFYRLFICAVGLIAVTCFAQILHVTEHSKEESDQNWARRKLT 72

  Fly    45 EQLL----LDILPRAQCPGEDEGSPMDEF-ADLFTVDQLRQGWVVLHVFAAVYFFILLAIICNDY 104
            :|::    ....|||         .:.|| .|:||..|.|.|.::||||.|||.|..|||:|:.:
Zfish    73 QQIIEENQTSSTPRA---------AIHEFPQDIFTKGQRRHGAILLHVFCAVYMFYALAIVCDVF 128

  Fly   105 FLPTVECICEDLHLSKDVAAATFMATATSMPEFFTNTISTLILESDMGLGTIIGSLMFNTLGVAG 169
            |:|::|.|||:||||:|||.|||||..:|.||.||:.|...|.:.|:|:|||:||.:||.|.:.|
Zfish   129 FVPSLEKICENLHLSEDVAGATFMAAGSSAPELFTSLIGVFITKGDLGVGTIVGSAVFNILVIIG 193

  Fly   170 LAALAIDKPVQLDWWPIARDCFIYVFNTIILLVLAWSGSISFTESCIMMGFLILYYLITFNNNKF 234
            :..:...:.:.|.|||:.||...|:.:.:.|:::.:...:.:.|:.|::....:|.||.    ||
Zfish   194 VCGIFAGQTITLTWWPLFRDSIFYILSVLALILIIYDEKVIWWETIILISMYGVYILIM----KF 254

  Fly   235 MPAIRVFIEDRMN-----CCFST-RYDLT--EPPENSAKAQLPLKKDPLSG---------DGLFV 282
            ...|..::|.|..     |..|: |.|::  |...:...:.:.|||...:|         |.|..
Zfish   255 NSQIWGWVEQRFGIPGQPCLVSSLRRDVSVGEASPHCDTSMILLKKGQNAGGQDSPVVMVDELMS 319

  Fly   283 LN-------------------LPENTSSMSSTANLTRNKHL------------------------ 304
            |:                   .|....||:....:|..:.|                        
Zfish   320 LHPHQFSFSEASLRVMITPHFSPRTRLSMAGRMLITERQRLIRNRSPGDSSGSGAGDTPGQDGPG 384

  Fly   305 ---------------------------------------------NDEDD--VADVVPGSIYAYP 322
                                                         :||:|  .||..|...:..|
Zfish   385 MEAVPWGLENGGALESETQPLEEPRRRSQGGELERVADIEDTQPKDDEEDEEEADEEPFRPFTVP 449

  Fly   323 RDASGWMQFWWIFVFPIKVTLSLLIPHPM--KYRRLYPLSFIMCILCIGGNAYLIVWMLTAFGVA 385
            .  ..|.|..|:|.:|:...|...:|:.:  ::.|.:.::|:...|.|...:||:|||:|.....
Zfish   450 E--GRWEQAKWMFSWPLSCLLYYTVPNCVLPRWERWFMVTFVASTLWIAVFSYLMVWMVTIISFT 512

  Fly   386 IHVPTIVMGLTFLAAGSTMPEAVSSLISLRNGENGIGVSNSLGANSLAILLSLGVPWFIKN-CIH 449
            :.:|.:|||:||||||:::|:.::|||..|.|...:.||||:|:|...|||.||.||.::. .:.
Zfish   513 LDIPDVVMGITFLAAGTSVPDCMASLIVARQGMGDMAVSNSIGSNIFDILLGLGFPWALRTLVVD 577

  Fly   450 YGTGEPQQVGTQGIEYNILILIISTMALFIILSFSGYRLTKRVGVALFTVYGVFIVLQILIE 511
            ||:  ...:.::|:.|::::|:.|.....:.:..:.:||.:|:|:.|..:|.:|::..|..|
Zfish   578 YGS--TVSINSKGLVYSVILLLASVFLTVLSVHLNHWRLDRRLGLGLMFLYAIFLLCSICFE 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17167NP_001015257.2 TIGR00367 85..503 CDD:273039 148/527 (28%)
Na_Ca_ex 86..229 CDD:279963 60/142 (42%)
Na_Ca_ex 356..509 CDD:279963 51/153 (33%)
slc24a6aXP_009289475.1 Na_Ca_ex <85..637 CDD:332332 161/568 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577439
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

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