DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17167 and slc24a1

DIOPT Version :9

Sequence 1:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_009291877.2 Gene:slc24a1 / 558299 ZFINID:ZDB-GENE-060503-191 Length:741 Species:Danio rerio


Alignment Length:645 Identity:170/645 - (26%)
Similarity:275/645 - (42%) Gaps:164/645 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 TVTQAKAATSNASSFLEVSLRYFDEQL------------LLDILPRAQCPGEDEGSPM-DEF-AD 71
            |.|:|.:.|:|.:.   |...|.|..|            ...::|....|...:...| .|: .|
Zfish    97 TTTEAPSTTTNRTI---VHCIYVDPDLPKPTPVPTPATETTTLVPNTTAPQPGDAPHMKGEYPED 158

  Fly    72 LFTVDQLRQGWVVLHVFAAVYFFILLAIICNDYFLPTVECICEDLHLSKDVAAATFMATATSMPE 136
            :|:::..|:|||.||:|..||.|:.|||:|:::|:||:..|.:.|.:|.|||.|||||...|.||
Zfish   159 IFSIEDRRKGWVSLHIFGMVYMFVSLAIVCDEFFVPTLGVITDKLAISDDVAGATFMAAGGSAPE 223

  Fly   137 FFTNTISTLILESDMGLGTIIGSLMFNTLGVAGLAALAIDKPVQLDWWPIARDCFIYVFNTIILL 201
            .||:.|...|..|::|:|||:||.:||.|.|.|:.||...:.:.|.|||:.||...|:.:.|:|:
Zfish   224 LFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGMCALFSREMLHLTWWPLFRDVSFYILDLIMLI 288

  Fly   202 VLAWSGSISFTESCIMMGFLILYYLITFNN-------------NKFMPAIRVFIEDRMNCCFSTR 253
            :.....:|.:.||.:::|...||  :||..             :|....::|...:.......|.
Zfish   289 IFFLDNTIMWWESMMLVGGYALY--VTFMKFNVQLERAFKSQLSKHKSIVKVIAVEEPEKDNGTS 351

  Fly   254 YDLTEPPENSAKAQLPLKK----------------------------DPLSGDGLF--------- 281
            .:...|||...|.:|.||.                            |||..:.:|         
Zfish   352 GEENRPPEPEDKNRLKLKPTLQRGGSSASLHNSTMRNTIFQLMIHTLDPLGEESVFNGDAKARSS 416

  Fly   282 ------------VLN-----LPENTSSMSSTANLTRNKHLNDEDDV------------------A 311
                        :||     ..||.....|.....:::...|..|.                  .
Zfish   417 LECKVKFKDKAQILNDMARGKVENKKKEKSGEGDDQSEQTKDSKDAPPGAKDEDTNQKSEAQKDG 481

  Fly   312 DVVPGSIYAYP--RDASG-------------------------------------------W--- 328
            |:..|.....|  .|.||                                           |   
Zfish   482 DIAAGGGSENPGGSDNSGDDDEDDSDEESDDDDDDDDDDDDDDDENEDEAGEDGDEPLSLEWPDT 546

  Fly   329 --MQFWWIFVFPIKVTLSLLIP---HPMKYRRLYPLSFIMCILCIGGNAYLIVWMLTAFGVAIHV 388
              .|..::|:.||...|.|.:|   :|.. ::.:.::|:..|:.|...:||:||.....|..|.:
Zfish   547 RRKQATYLFLLPIVFPLWLTVPDVRNPAS-KKFFVITFLGSIVWIAIFSYLMVWWAHQVGETIGI 610

  Fly   389 PTIVMGLTFLAAGSTMPEAVSSLISLRNGENGIGVSNSLGANSLAILLSLGVPWFIKNCIHYGTG 453
            ...:||||.||||:::|:.::|:|..|.|...:.||:|:|:|...|.:.|.|||.:.:..|  :.
Zfish   611 SEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITMGLPVPWLMFSFFH--SF 673

  Fly   454 EPQQVGTQGIEYNILILIISTMALFIILSFSG--YRLTKRVGVALFTVYGVFIVLQILIE 511
            .|..|.:.|:...|::|.:  |.||:|:|.:.  :|:.|.:|..:|.:|.||:||.:::|
Zfish   674 APVPVSSNGLFCAIVLLFL--MLLFVIISIAACKWRMNKVLGFTMFILYFVFLVLSVMLE 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17167NP_001015257.2 TIGR00367 85..503 CDD:273039 146/557 (26%)
Na_Ca_ex 86..229 CDD:279963 59/142 (42%)
Na_Ca_ex 356..509 CDD:279963 52/154 (34%)
slc24a1XP_009291877.2 Na_Ca_ex <112..741 CDD:332332 164/627 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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