DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17167 and Slc24a4

DIOPT Version :10

Sequence 1:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_742164.2 Gene:Slc24a4 / 238384 MGIID:2447362 Length:622 Species:Mus musculus


Alignment Length:568 Identity:163/568 - (28%)
Similarity:281/568 - (49%) Gaps:106/568 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EQLLLDILPRAQCPGEDEGSPM---------DEF-ADLFTVDQLRQGWVVLHVFAAVYFFILLAI 99
            :.:|||.....:......|:|:         .|| .|||:..:.:.|.|:||:..|:|.|..|||
Mouse    52 KHVLLDTWRNRKLMAPINGTPLAKNCTDPAIHEFPTDLFSNKERQHGAVLLHILGALYMFYALAI 116

  Fly   100 ICNDYFLPTVECICEDLHLSKDVAAATFMATATSMPEFFTNTISTLILESDMGLGTIIGSLMFNT 164
            :|:|:|:|::|.|||.||||:|||.|||||..:|.||.|.:.|...|...|:|:|||:||.:||.
Mouse   117 VCDDFFVPSLEKICEKLHLSEDVAGATFMAAGSSTPELFASVIGVFITHGDVGVGTIVGSAVFNI 181

  Fly   165 LGVAGLAALAIDKPVQLDWWPIARDCFIYVFNTIILLVLAWSGSISFTESCIMMGFLILYYLITF 229
            |.:.|:..|...:.|:|.||.:.||...|..:.|:|:...:...|.:.|..:::...:.|.||..
Mouse   182 LCIIGVCGLFAGQVVRLTWWAVCRDSVYYTLSVIVLIAFIYDEEIVWWEGLVLIILYVFYILIMK 246

  Fly   230 NNNKFMPAIRVF-----------------IEDRMNCCFSTRYDLTEPPENSAKAQLPLKKDPL-- 275
            .|.|    ::.|                 :||..:....:..|.:.|.....|.:.|..|.|:  
Mouse   247 YNMK----MQTFFTTKQKSIANGNPVSNELEDGNDLYDGSYDDPSVPLLGQVKEKPPYGKTPVVM 307

  Fly   276 ----------------SGDGLFVLNL--PENTSSMSS------------TANLTRNKHL------ 304
                            :|..:.:.|.  |.....|:|            :||...:|.|      
Mouse   308 VDEILSSSPPKFTFPEAGLRIMITNKFGPRTRLRMASRIIINERQRLINSANGVNSKPLQNGRHE 372

  Fly   305 ----------NDED------------------DVADVVPGSIYAYPRDASGWMQFWWIFVFPIKV 341
                      |.||                  :..:.|..|.::.| :|.| .:..|:|.:|:..
Mouse   373 NMENGNVPVENPEDPQQGQEQQPPPQPPPPEPESVETVFLSPFSMP-EAKG-DKAKWVFTWPLIF 435

  Fly   342 TLSLLIPHPMK--YRRLYPLSFIMCILCIGGNAYLIVWMLTAFGVAIHVPTIVMGLTFLAAGSTM 404
            .|.:.||:..|  :.:.:.::||...|.|...:||:||::|..|..:.:|.::||:||||||:::
Mouse   436 LLCVTIPNCSKPRWEKFFMVTFITATLWIAVFSYLMVWLVTIIGYTLGIPDVIMGITFLAAGTSV 500

  Fly   405 PEAVSSLISLRNGENGIGVSNSLGANSLAILLSLGVPWFIKN-CIHYGTGEPQQVGTQGIEYNIL 468
            |:.::|||..|.|...:.|||::|:|...||:.||:||.::. .|:||:  ..::.::|:.|:: 
Mouse   501 PDCMASLIVARQGLGDMAVSNTIGSNVFDILVGLGIPWGLQTMVINYGS--TVKINSRGLVYSV- 562

  Fly   469 ILIISTMALFII-LSFSGYRLTKRVGVALFTVYGVFIVLQILIEMNVF 515
            :|::.::||.:: :..:.:||.:::|:.:..:|.||:...|:||.|||
Mouse   563 VLLLGSVALTVLGIHLNKWRLDRKLGIYVLVLYAVFLCFSIMIEFNVF 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17167NP_001015257.2 2A1904 <53..>247 CDD:273344 74/220 (34%)
ECM27 133..507 CDD:440296 117/460 (25%)
Slc24a4NP_742164.2 2A1904 <80..606 CDD:273344 153/534 (29%)
Alpha-1 139..179 20/39 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 358..408 7/49 (14%)
Alpha-2 495..526 13/30 (43%)

Return to query results.
Submit another query.