DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17167 and ncx-9

DIOPT Version :9

Sequence 1:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_504342.2 Gene:ncx-9 / 182576 WormBaseID:WBGene00003574 Length:701 Species:Caenorhabditis elegans


Alignment Length:633 Identity:110/633 - (17%)
Similarity:208/633 - (32%) Gaps:240/633 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 VVLHVFAAVYFFILLAIICNDYFLPTVECICEDLHLSKDVAAATFMATATSMPEFFTNTISTLIL 147
            ::|.:...:..|::::.|.:|:|.|.:..|...|.:|:.:|..||:|.....|:.|::..|.|..
 Worm   104 IILGILYLIILFVIMSSIADDFFCPAISGIVSHLRMSESIAGVTFLAFGNGAPDVFSSISSVLTT 168

  Fly   148 ---ESDMGLGTIIGSLMFNTLGVAGLAALAIDKPVQLDWWPIARDCFIYVFNTIILLVLAWSGSI 209
               ::|:.||.:.|:.:|.|..|  ||.:...|..::...|..||...|: .|:..:|..:   :
 Worm   169 PKPKADLALGDLFGTSIFVTTVV--LAIIIFTKSFKVAIIPTLRDLIFYM-TTLAFIVFCF---L 227

  Fly   210 SFTESCIMM--GFLILY--YLITF----------------NNNKFMPAIRVFIEDRMNCCFSTRY 254
            .|.:..:.|  .||.:|  |::|.                ..||.:.                  
 Worm   228 KFDKIEVWMPATFLGIYGVYVVTVIILGIYRTHRKKRNLKKKNKELE------------------ 274

  Fly   255 DLTEPPENSAK-----AQLPLKKDPLS---------GDGLFVLNLPENTSSMSSTANLTRNKHLN 305
            |....|.::|.     ..:.||::.:|         |...|:.||  ..:::..|.|...|.:.|
 Worm   275 DFLSRPSSAASTTPIFGAMKLKEETISVSALFHFMIGYSQFIKNL--TRANLKRTTNNNNNDNKN 337

  Fly   306 DEDDVADVVPGSIYAYP------------------------RDASG------------------- 327
            ::..:.::.....|:.|                        .|..|                   
 Worm   338 EKRGIVNLGFSEPYSIPSERKISTIFKQNTFETDLESLESLADLDGSDDEGREEKFGYAHHTVFT 402

  Fly   328 -------------------WMQFWWIF--------------------------------VFPIKV 341
                               |..:.|::                                ||..|:
 Worm   403 SHDQISLVASEIEEIEITTWRSWDWVWDLFNHLKSWPSRDEFSEMNIFIKIVTVIKVVPVFFFKL 467

  Fly   342 TL---------SLLIPH---------------------------------------------PMK 352
            |:         .|.|.|                                             |:.
 Worm   468 TVPSNEMSWCKPLFILHCFASIQFALFSIQIITLKPFDGSPGLWLYGLGFSAILAMVAMYFLPLS 532

  Fly   353 -----YRRLYP-LSFIMCILCIGGNAYLIVWMLTAFGVAIHVPTIVMGLTFLAAGSTMPEAVSSL 411
                 |:.:|. |.|:|.|..|...:..||.::|..||...:...::|||.:|..:.:.:.|:.:
 Worm   533 KEQKYYKEIYSYLGFLMSIAWIYATSNEIVSVVTMIGVVTGLSMELLGLTIMAWSNCIGDIVADI 597

  Fly   412 ISLRNGENGIGVSNSLGANSLAILLSLGVPWFIKNCIHYGTGEPQQVGTQGIEYNILI------- 469
            ..::.|...:.::.::|.....:|:..|:|:.|             ...||.|..:||       
 Worm   598 AVVKQGYPKMAMAAAIGGPLFNLLIGFGLPFTI-------------AAAQGKEMELLINPVYRLL 649

  Fly   470 ---LIISTMALFIILSFSGYRLTKRVGVALFTVYGVFIVLQILIEMNV 514
               |.||.:..|:.|....:.:.:...|.|..::.||::...|.|.:|
 Worm   650 MLFLGISLVTTFVALFIQRFTVRRPHAVLLIFIFVVFLIFICLAEFHV 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17167NP_001015257.2 TIGR00367 85..503 CDD:273039 105/618 (17%)
Na_Ca_ex 86..229 CDD:279963 38/149 (26%)
Na_Ca_ex 356..509 CDD:279963 36/163 (22%)
ncx-9NP_504342.2 PLN03151 68..689 CDD:215604 107/623 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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