DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17167 and ncx-8

DIOPT Version :9

Sequence 1:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_504341.1 Gene:ncx-8 / 182575 WormBaseID:WBGene00003573 Length:703 Species:Caenorhabditis elegans


Alignment Length:620 Identity:107/620 - (17%)
Similarity:213/620 - (34%) Gaps:213/620 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 VVLHVFAAVYFFILLAIICNDYFLPTVECICEDLHLSKDVAAATFMATATSMPEFF---TNTIST 144
            :::.:...::.|::::.|.:|:|.|::..|...|.:|:.:|..||:|.....|:.|   ::.:||
 Worm   105 IIVGIIYLIFLFVVMSTIADDFFCPSISGIVTHLKMSESIAGVTFLAFGNGAPDVFGSISSVLST 169

  Fly   145 LILESDMGLGTIIGSLMFNTLGVAGLAALAIDKPVQLDWWPIARDCFIYVFNTIILLVLAWSGSI 209
            ...::.:.||.:.|:.:|.|..|  ||.:...|..::...|..||...|:. |:..:...:   :
 Worm   170 PKPKAALALGDLFGTSIFVTTVV--LAIIIFTKSFKVAIIPTLRDLIFYMI-TLAFITFCF---L 228

  Fly   210 SFTESCIMM--GFLILY--YLITFNNNKFMPAIRVFIEDRMNCCFSTRYDLTEPPEN------SA 264
            .|.:..:.|  .||.:|  ||:|      :.|..::...|.|.....:.:..:..|:      |.
 Worm   229 KFDKIEVWMPATFLGIYAVYLLT------VIAFSIYRTRRKNLKKKKQLESEKDDESAISRPESV 287

  Fly   265 KAQLPL------KKDPLSGDGLF--------VLNLPENTSSMSSTAN------------------ 297
            .:.:|:      |.:.:|...||        .:.....|:.:.|..|                  
 Worm   288 ASNMPICEKLEKKTESMSVSTLFHVMVGLSRFMKKLNRTNKIQSIENKKQGFVNEGFSESLDADE 352

  Fly   298 -----------LTRNKHLN---------DEDDVAD------------------------------ 312
                       :.|||.|:         ||.:.:|                              
 Worm   353 LTLKRNRMISLIFRNKTLDTDLESMKTLDEMESSDDEGREEEFAYAHHTVFTSHDQMSLAATEFE 417

  Fly   313 -------------------------------------------VVPGSI--YAYPRDASGW---- 328
                                                       ::|...  ...|.:...|    
 Worm   418 FRELTTWRSRDWIIDLLYHLKPWPSREEFSEMNIFVKIIMIIRIIPSFFMKMTIPSNEMSWCKPL 482

  Fly   329 --------MQF------------------WWIFVFPIKVTLSLL------IPHPMKY-RRLYP-L 359
                    :||                  .|::......|::||      :...:|| :.:|. |
 Worm   483 FLLHCFASIQFALFSIQIINLKPFDGSPGLWLYGLAFSATIALLALCFLPLNKELKYHKEVYSYL 547

  Fly   360 SFIMCILCIGGNAYLIVWMLTAFGVAIHVPTIVMGLTFLAAGSTMPEAVSSLISLRNGENGIGVS 424
            .|:|.|..|...|..|:.::|..||...:...::|||.::....:.:.|:.:..::.|...:.::
 Worm   548 GFLMSIAWIYATANEIISVMTMVGVVTGLSQELLGLTVMSWSDCIGDIVADIAVIKQGYPKMAMA 612

  Fly   425 NSLGANSLAILLSLGVPWFIKNCIHYGTGEPQQVGTQGIE--------YNILILI--ISTMALFI 479
            .::|.....:|:..|:|:.|             ...||.:        |.||:|.  ||.:..|:
 Worm   613 AAIGGPLFNLLIGFGLPFTI-------------ASAQGKQIDLIINPVYRILLLFLGISLVTTFV 664

  Fly   480 ILSFSGYRLTKRVGVALFTVYGVFIVLQILIEMNV 514
            .|....:.:.....|||..::..|::...|.|.:|
 Worm   665 ALFIERFTVRWPHAVALIFIFINFVIFVCLAEFHV 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17167NP_001015257.2 TIGR00367 85..503 CDD:273039 103/605 (17%)
Na_Ca_ex 86..229 CDD:279963 37/149 (25%)
Na_Ca_ex 356..509 CDD:279963 35/163 (21%)
ncx-8NP_504341.1 PLN03151 61..628 CDD:215604 87/534 (16%)
Na_Ca_ex 107..253 CDD:279963 38/157 (24%)
Na_Ca_ex 544..681 CDD:279963 32/149 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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