DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17167 and ncx-6

DIOPT Version :9

Sequence 1:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_499146.2 Gene:ncx-6 / 182354 WormBaseID:WBGene00003571 Length:590 Species:Caenorhabditis elegans


Alignment Length:533 Identity:108/533 - (20%)
Similarity:197/533 - (36%) Gaps:153/533 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 VVLHVFAAVY---FFILLAIICNDYFLPTVECICEDLHLSKDVAAATFMATATSMPEFF---TNT 141
            ::|.:...:|   .||:::...:|:|.|::..|...|.:|:.||..||||.....|:.|   .:.
 Worm    97 IILIITGVIYMLVLFIMVSSAADDFFSPSISSIVAHLRISESVAGVTFMAFGNGAPDVFGAIASV 161

  Fly   142 ISTLILESDMGLGTIIGSLMFNTLGVAGLAALAIDKPVQLDWWPIARDCFIYVFNTIILLVLAWS 206
            :|:...::|:.||.:.|:.:|.|..|  ||.....:|.:.:.:...||...|      |:.||: 
 Worm   162 LSSPTPKADLALGELFGAGLFVTTMV--LAVTIFTRPFKAEVFSSIRDIAFY------LVALAF- 217

  Fly   207 GSISFTESCIMMGFLILYY-------LITFNNNKFMPAIRVFIEDRMNCCFSTRYDLTEPPENSA 264
                       :.|..:||       .|||.....:....|.:...::    .|:...|...:..
 Worm   218 -----------LAFCFVYYDHVEIWMPITFLGVYLIYVCTVILSQILH----NRHKKDEEKVDEV 267

  Fly   265 KAQLPLKKDPLSGD-------GLFVLNL--------------PENTSSMSSTANLTRNKHLN--- 305
            |.   :..|.|..|       |..||:.              |..|.|.....: ...:||.   
 Worm   268 KT---VDTDSLEDDDDIYVSHGHHVLHAHEVMKMEAEIEAVEPLKTWSFRGVVH-DFKEHLKPWP 328

  Fly   306 --DEDD----------VADVVPG-------------------------------------SIYAY 321
              ||.|          |.:.:|.                                     ||..:
 Worm   329 SMDEWDEMNIFQKVIAVLNTIPNFLFKLTIPHSEQPWSKPITLLQCLICPVFLLFCIQVCSISPF 393

  Fly   322 PRDASGWMQFWWIFVFPIKVTLSLLI-----PHPMKYRRLYPLS-FIMCILCIGGNAYLI----V 376
            |.....||   :..:..:.:|.::|.     ..|..|:.|...: |:|.|..|    |||    |
 Worm   394 PNSPGLWM---YGLILSVLLTAAVLFFTELHKEPPFYKSLISYAGFLMSIAWI----YLISSEVV 451

  Fly   377 WMLTAFGVAIHVPTIVMGLTFLAAGSTMPEAVSSLISLRNGENGIGVSNSLGANSLAILLSLGVP 441
            .::|..||...|...|:|||.||..:::.:.::.:...:.|...:.::.::|.....:|:..|:|
 Worm   452 NVVTMLGVVSRVSHEVLGLTILAWSNSIGDLIADVSVAKQGYPRMAMAAAIGGQLFNLLIGFGLP 516

  Fly   442 WFIKNCIHYGTGEPQQVGTQGIE------YNILILIISTMALF-IILSFSGYRLTKRVG----VA 495
            :.|           .::..:.|.      |.:|:|.::...:| :|..|:.....:|:.    |.
 Worm   517 FTI-----------AKIQGKSISMIINPTYRLLMLFLAISLIFTLIAMFAQKYFLRRIHSYSLVF 570

  Fly   496 LFTVYGVFIVLQI 508
            ::..:.|||.|.:
 Worm   571 IYISFFVFIGLSL 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17167NP_001015257.2 TIGR00367 85..503 CDD:273039 104/524 (20%)
Na_Ca_ex 86..229 CDD:279963 38/155 (25%)
Na_Ca_ex 356..509 CDD:279963 38/169 (22%)
ncx-6NP_499146.2 Na_Ca_ex 105..249 CDD:279963 41/163 (25%)
Na_Ca_ex 431..579 CDD:279963 34/162 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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