DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17167 and ncx-4

DIOPT Version :10

Sequence 1:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_001040663.1 Gene:ncx-4 / 172834 WormBaseID:WBGene00003569 Length:596 Species:Caenorhabditis elegans


Alignment Length:520 Identity:150/520 - (28%)
Similarity:249/520 - (47%) Gaps:57/520 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LLDILPRAQCPGEDEGSPMDEF-ADLFTVDQLRQGWVVLHVFAAVYFFILLAIICNDYFLPTVEC 111
            ||....|:..|...:.:...:| .|.|:::|.:.|:||||:...:|.|:.|||:|:::|:|:::.
 Worm    66 LLPTCNRSLAPPAPDVNDDGQFPPDPFSLEQRQNGFVVLHMCGLIYMFVSLAIVCDEFFVPSLDV 130

  Fly   112 ICEDLHLSKDVAAATFMATATSMPEFFTNTISTLILESDMGLGTIIGSLMFNTLGVAGLAALAID 176
            :.|.|.||.|||.|||||...|.|||||:.|...|.::::|:|||:||..||.|.|.....|...
 Worm   131 LTEKLSLSDDVAGATFMAAGGSAPEFFTSVIGVFIAQNNVGIGTIVGSATFNILCVLAFCTLFSK 195

  Fly   177 KPVQLDWWPIARDCFIYVFNTIILLVLAWSGSISFTESCIMMGFLILYYLITFNNNKFMPAIRVF 241
            ..:.|.|||:.||..||:....:|:.......|:|.|:..|....|:|..:...|.:....::..
 Worm   196 SILDLTWWPLFRDVSIYMLALAMLVFFFMDEMITFPEALAMFSIYIVYCTVMKFNGQLEQLVKKG 260

  Fly   242 IEDRMNCCFSTRYDLTEPPEN------------------SAKAQ-LP-LKKDPLSGDGLFVL--- 283
            .:........|:....:.|.|                  ||:.| :| |....:..:|:..|   
 Worm   261 SDSEEASAHETQKLAADVPHNNNNNDLAQLEGSELRRRSSARRQSVPILHSGTMFRNGIMQLMNQ 325

  Fly   284 ---NLPENT---SSMSSTANLTRNKH----LNDEDDVADVVPGSIYAY----------PRDASGW 328
               .|||::   .|..|.:|:....|    ||....:.|.....|...          |.|.: |
 Worm   326 TLEQLPEDSEEDDSSRSRSNVNIESHDMHRLNVNQSMPDRRSSQIEEIKSLLEEQEEKPLDMT-W 389

  Fly   329 MQFW-----WIFVFPIKVTLSLLIPHPMK--YRRLYPLSFIMCILCIGGNAYLIVWMLTAFGVAI 386
            .:.|     ::.:.|:.:.:.:.||...|  .|.|||.:||:.||.|...:||:||.....|...
 Worm   390 PETWVKRLTYVLLAPVVIPMWVTIPDVRKSHNRGLYPATFIISILWIAFFSYLMVWWANTIGETF 454

  Fly   387 HVPTIVMGLTFLAAGSTMPEAVSSLISLRNGENGIGVSNSLGANSLAILLSLGVPWFIKNCIHY- 450
            .:||.::|||.||||:::|:.::|:|..|.|...:.||:|:|:|...:.:.|.:||.:...|.| 
 Worm   455 VIPTEIIGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDVCVGLPIPWLLYFLIEYI 519

  Fly   451 -GTGEPQ---QVGTQGIEYNILILIISTMALFIILSFSGYRLTKRVGVALFTVYGVFIVLQILIE 511
             ...||.   .|.::|:..::.:|.|..:.|...:..||:::.|..|:.:...|..|.|..:.:|
 Worm   520 KHPNEPLSPISVSSKGLLCSVGMLFIMLIVLVFAIFLSGWKMNKIFGILMIVSYVFFCVFSVSLE 584

  Fly   512  511
             Worm   585  584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17167NP_001015257.2 2A1904 <53..>247 CDD:273344 66/194 (34%)
ECM27 133..507 CDD:440296 116/428 (27%)
ncx-4NP_001040663.1 2A1904 <48..594 CDD:273344 150/520 (29%)

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