DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17167 and ncx-4

DIOPT Version :9

Sequence 1:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_001040663.1 Gene:ncx-4 / 172834 WormBaseID:WBGene00003569 Length:596 Species:Caenorhabditis elegans


Alignment Length:520 Identity:150/520 - (28%)
Similarity:249/520 - (47%) Gaps:57/520 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LLDILPRAQCPGEDEGSPMDEF-ADLFTVDQLRQGWVVLHVFAAVYFFILLAIICNDYFLPTVEC 111
            ||....|:..|...:.:...:| .|.|:::|.:.|:||||:...:|.|:.|||:|:::|:|:::.
 Worm    66 LLPTCNRSLAPPAPDVNDDGQFPPDPFSLEQRQNGFVVLHMCGLIYMFVSLAIVCDEFFVPSLDV 130

  Fly   112 ICEDLHLSKDVAAATFMATATSMPEFFTNTISTLILESDMGLGTIIGSLMFNTLGVAGLAALAID 176
            :.|.|.||.|||.|||||...|.|||||:.|...|.::::|:|||:||..||.|.|.....|...
 Worm   131 LTEKLSLSDDVAGATFMAAGGSAPEFFTSVIGVFIAQNNVGIGTIVGSATFNILCVLAFCTLFSK 195

  Fly   177 KPVQLDWWPIARDCFIYVFNTIILLVLAWSGSISFTESCIMMGFLILYYLITFNNNKFMPAIRVF 241
            ..:.|.|||:.||..||:....:|:.......|:|.|:..|....|:|..:...|.:....::..
 Worm   196 SILDLTWWPLFRDVSIYMLALAMLVFFFMDEMITFPEALAMFSIYIVYCTVMKFNGQLEQLVKKG 260

  Fly   242 IEDRMNCCFSTRYDLTEPPEN------------------SAKAQ-LP-LKKDPLSGDGLFVL--- 283
            .:........|:....:.|.|                  ||:.| :| |....:..:|:..|   
 Worm   261 SDSEEASAHETQKLAADVPHNNNNNDLAQLEGSELRRRSSARRQSVPILHSGTMFRNGIMQLMNQ 325

  Fly   284 ---NLPENT---SSMSSTANLTRNKH----LNDEDDVADVVPGSIYAY----------PRDASGW 328
               .|||::   .|..|.:|:....|    ||....:.|.....|...          |.|.: |
 Worm   326 TLEQLPEDSEEDDSSRSRSNVNIESHDMHRLNVNQSMPDRRSSQIEEIKSLLEEQEEKPLDMT-W 389

  Fly   329 MQFW-----WIFVFPIKVTLSLLIPHPMK--YRRLYPLSFIMCILCIGGNAYLIVWMLTAFGVAI 386
            .:.|     ::.:.|:.:.:.:.||...|  .|.|||.:||:.||.|...:||:||.....|...
 Worm   390 PETWVKRLTYVLLAPVVIPMWVTIPDVRKSHNRGLYPATFIISILWIAFFSYLMVWWANTIGETF 454

  Fly   387 HVPTIVMGLTFLAAGSTMPEAVSSLISLRNGENGIGVSNSLGANSLAILLSLGVPWFIKNCIHY- 450
            .:||.::|||.||||:::|:.::|:|..|.|...:.||:|:|:|...:.:.|.:||.:...|.| 
 Worm   455 VIPTEIIGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDVCVGLPIPWLLYFLIEYI 519

  Fly   451 -GTGEPQ---QVGTQGIEYNILILIISTMALFIILSFSGYRLTKRVGVALFTVYGVFIVLQILIE 511
             ...||.   .|.::|:..::.:|.|..:.|...:..||:::.|..|:.:...|..|.|..:.:|
 Worm   520 KHPNEPLSPISVSSKGLLCSVGMLFIMLIVLVFAIFLSGWKMNKIFGILMIVSYVFFCVFSVSLE 584

  Fly   512  511
             Worm   585  584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17167NP_001015257.2 TIGR00367 85..503 CDD:273039 136/472 (29%)
Na_Ca_ex 86..229 CDD:279963 55/142 (39%)
Na_Ca_ex 356..509 CDD:279963 51/157 (32%)
ncx-4NP_001040663.1 2A1904 <48..594 CDD:273344 150/520 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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