DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17167 and slc24a5

DIOPT Version :9

Sequence 1:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_002936612.2 Gene:slc24a5 / 100490024 XenbaseID:XB-GENE-853669 Length:546 Species:Xenopus tropicalis


Alignment Length:518 Identity:159/518 - (30%)
Similarity:261/518 - (50%) Gaps:51/518 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LFFTLCGSFLTVTQAKAATSNASSFLEVSLRYFDEQLLLDILPRAQCPGEDE----GSPMDEF-A 70
            ||..:||:...|.|  .|||                |::....|.:...|:|    .||..|| .
 Frog    55 LFLIVCGTVYLVNQ--VATS----------------LVVTGTQRIRRDVENETLCIASPSSEFPE 101

  Fly    71 DLFTVDQLRQGWVVLHVFAAVYFFILLAIICNDYFLPTVECICEDLHLSKDVAAATFMATATSMP 135
            |.||..:.:||.:::|....:|.|:.:||:|..||:|::|.|.|.|.||:|||.|||||..:|.|
 Frog   102 DFFTEQERKQGGLIIHFLIILYMFLAVAIVCESYFIPSLEVISERLGLSQDVAGATFMAIGSSAP 166

  Fly   136 EFFTNTISTLILESDMGLGTIIGSLMFNTLGVAGLAALAIDKPVQLDWWPIARDCFIYVFNTIIL 200
            ||.|..:...:.:.|:|:.||:||.::|.||:.....|......:|..||:.|||..|..:...:
 Frog   167 EFVTVFLGVFVTKGDIGVSTIVGSAVYNLLGICAACCLLSLSVSRLTCWPLFRDCVAYAISVAAV 231

  Fly   201 LVLAWSGSISFTESCIMMGFLILYYLITFNNNKFMPAIRVFIEDRMN-CCFSTRYDLT-----EP 259
            :.:.:...|.:.||    ..|||.|.|......|...|..:|..|.: ||...|..:.     ||
 Frog   232 IAITFDNRIYWYES----ASLILIYGIYIVTMCFDIRINQYIMRRFSPCCTCCREAMVGNTEHEP 292

  Fly   260 PENSAKAQLP-LKKDPLSGDGLFVLNLPENTSSMSSTANLTRNKHLNDEDDVADVVPGSIYAYPR 323
            .....:..|| :::...|..|:|    .|.:.....:.:|:..|..::.       |.|::..|.
 Frog   293 LLGWKEDSLPVIRRHSRSDSGIF----QEESDYSQLSISLSGLKESSNN-------PPSVFTMPE 346

  Fly   324 DASGWMQFWWIFVFPIKVTLSLLIP--HPMKYRRLYPLSFIMCILCIGGNAYLIVWMLTAFGVAI 386
              :...:..|:...||...|.|.:|  ...:::.|:.|:|:|..:.|....|::|||:|..|..:
 Frog   347 --NDLKRIIWVLSLPIITLLYLTVPDCRRKRWKNLFILTFLMSAVWISAVTYILVWMVTVVGETL 409

  Fly   387 HVPTIVMGLTFLAAGSTMPEAVSSLISLRNGENGIGVSNSLGANSLAILLSLGVPWFIKNCIHYG 451
            .:|..|||||.||||:::|:.|:|::..|.|:..:.:||.:|:| :..:|.||||||||. :...
 Frog   410 SIPDTVMGLTLLAAGTSIPDTVASVLVAREGKGDMAMSNIVGSN-VFDMLCLGVPWFIKT-VFVD 472

  Fly   452 TGEPQQVGTQGIEYNILILIISTMALFIILSFSGYRLTKRVGVALFTVYGVFIVLQILIEMNV 514
            ...|.:|.:.||.|..:.|:.|.:.:|:.:..:|::|.|::||....:|.:|:.|.||.|:.:
 Frog   473 RSAPVEVNSSGITYTTISLLFSILFIFVAIHLNGWKLDKKLGVMCLLMYLLFVTLSILYELGI 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17167NP_001015257.2 TIGR00367 85..503 CDD:273039 132/426 (31%)
Na_Ca_ex 86..229 CDD:279963 53/142 (37%)
Na_Ca_ex 356..509 CDD:279963 55/152 (36%)
slc24a5XP_002936612.2 2A1904 <95..>274 CDD:273344 65/182 (36%)
2A1904 <332..536 CDD:273344 68/215 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63129
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.030

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