DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12061 and SLC24A1

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_004718.1 Gene:SLC24A1 / 9187 HGNCID:10975 Length:1099 Species:Homo sapiens


Alignment Length:650 Identity:153/650 - (23%)
Similarity:238/650 - (36%) Gaps:269/650 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 PNLM----RQKSWIAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMTYDVAGATFLAAST 106
            |:|.    |::.|:.:.|..:  ||:||.||||||:|.|||:..:...|:::.|||||||:||..
Human   442 PDLFSVEERRQGWVVLHVFGM--MYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGG 504

  Fly   107 SAPELFVNFVGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFTQP-TKLDWWPVTRDTAWYLIAI 170
            ||||||.:.:|.|:::.::|:||||||:|||||.:.|.|.:|::. ..|.|||:.||.::|::.:
Human   505 SAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCSLFSREILNLTWWPLFRDVSFYILDL 569

  Fly   171 ASLTYVLWDSLVMWYEAFALLLLYISYVIQLSFDRRIQNLVRHE--------------------- 214
            ..|.....|||:.|:|:..|||.|..||..:.:::.|:..|:.:                     
Human   570 IMLILFFLDSLIAWWESLLLLLAYAFYVFTMKWNKHIEVWVKEQLSRRPVAKVMALEDLSKPGDG 634

  Fly   215 -HAESELLDE-----------------------------------DPM----------------- 226
             .|..||.|.                                   ||:                 
Human   635 AIAVDELQDNKKLKLPSLLTRGSSSTSLHNSTIRSTIYQLMLHSLDPLREVRLAKEKEEESLNQG 699

  Fly   227 ------------TREEEPLK--------------------------------------GFRDHVC 241
                        ..||||.|                                      |......
Human   700 ARAQPQAKAESKPEEEEPAKLPAVTVTPAPVPDIKGDQKENPGGQEDVAEAESTGEMPGEEGETA 764

  Fly   242 AKPKTEYNFYQWT---------------------------------------------------- 254
            .:.:||......|                                                    
Human   765 GEGETEEKSGGETQPEGEGETETQGKGEECEDENEAEGKGDNEGEDEGEIHAEDGEMKGNEGETE 829

  Fly   255 ----------------------------------------------------------------- 254
                                                                             
Human   830 SQELSAENHGEAKNDEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNE 894

  Fly   255 ------W---------WAIKYPAELMLACTVP-----SARSIFFLSMISAILWISLISYLLTWFL 299
                  |         :....|....|..|||     .:|..|..:.:.:|:||::.|||:.|:.
Human   895 EPLSLDWPETRQKQAIYLFLLPIVFPLWLTVPDVRRQESRKFFVFTFLGSIMWIAMFSYLMVWWA 959

  Fly   300 TILGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKGYGSMAICNAIGSNTFDILVCLGLPWLL 364
            ..:|..:.|.:.|||||:||||||:|::.:|.||::||.|.||:.:::|||.|||.|.|.:||||
Human   960 HQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWLL 1024

  Fly   365 KILIY-QQKIDIDSTALTITTAMLVVTAAVLYLGLLARRFVMGKTVGYLSIIFYALFLIIACTLE 428
            ..||. .|.:.:.|..|.....:|.:....:...:.:.::.|.|.:|:...:.|.:||||:..||
Human  1025 FSLINGLQPVPVSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKILGFTMFLLYFVFLIISVMLE 1089

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 143/623 (23%)
Na_Ca_ex 62..199 CDD:279963 65/137 (47%)
Na_Ca_ex 276..424 CDD:279963 55/148 (37%)
SLC24A1NP_004718.1 2A1904 1..1099 CDD:273344 152/649 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 123..150
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..199
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 284..304
Alpha-1 494..534 23/39 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 690..901 9/210 (4%)
Alpha-2 979..1010 15/30 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.