DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12061 and Slc24a3

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_445957.2 Gene:Slc24a3 / 85267 RGDID:69256 Length:642 Species:Rattus norvegicus


Alignment Length:548 Identity:174/548 - (31%)
Similarity:261/548 - (47%) Gaps:155/548 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ARNCTLPAIVEFP-----NLMRQKSWIAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMT 93
            ::|||.||:.|||     |..|::.  |:|:..|.:||:|..|||||||:.||::|::|..|.::
  Rat    83 SKNCTEPALHEFPRDIFSNEDRRQG--AVVLHVLCAMYMFYALAIVCDDFFVPSLEKICERLHLS 145

  Fly    94 YDVAGATFLAASTSAPELFVNFVGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFT-QPTKLDWW 157
            .|||||||:||.:||||||.:.:|.|:|.||:|:||||||:|||||.|.||||:|. |...|..|
  Rat   146 EDVAGATFMAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFAGQVVALSSW 210

  Fly   158 PVTRDTAWYLIAIASLTYVLWDSLVMWYEAFALLLLYISYVIQLS--------FDRRIQ---NLV 211
            .:.||:.:|.:::.:|...::|..|.|:|:..|:|:|:.|:|.:.        |:||.:   |:|
  Rat   211 CLLRDSIYYTLSVVALIVFIYDEKVSWWESLVLVLMYLIYIIIMKYNACIHQCFERRTKGAGNMV 275

  Fly   212 R--------------------------HEHAESELLDE------------------------DPM 226
            .                          |..|...::||                        .|.
  Rat   276 NGLANNAEIDDSSNCDATVVLLKKANFHRKASVIMVDELLSAYPHQLSFSEAGLRIMITSHFPPK 340

  Fly   227 TR------------------------EEE--------------------PLKGF----RDHVCAK 243
            ||                        |.|                    |.:|.    ||.:.|:
  Rat   341 TRLSMASRMLINERQRLINSRAYTNGESEVAIKIPIKHTVENGTGPSSAPDRGVNGTRRDDIVAE 405

  Fly   244 ---------------------------PKTEYN----FYQWTWWAIKYPAELMLACTVPSA---- 273
                                       |.|.::    ..:...||..:|...:|..|||:.    
  Rat   406 ADNETENENEDENNENDEEEDEDDDEGPYTPFDPPSGKLETVKWAFTWPLSFVLYFTVPNCNKPH 470

  Fly   274 -RSIFFLSMISAILWISLISYLLTWFLTILGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKG 337
             ...|.::..|:.|||:..||::.|.:||:||.|.|||.|||:|.||||||||:..:|.||:::|
  Rat   471 WEKWFMVTFASSTLWIAAFSYMMVWMVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQG 535

  Fly   338 YGSMAICNAIGSNTFDILVCLGLPWLLKILI--YQQKIDIDSTALTITTAMLVVTAAVLYLGLLA 400
            .|.||:.|:||||.||||:.|||||.|:.|.  |...|.::|..|..:..:|:.:..|...|:..
  Rat   536 MGDMAVSNSIGSNVFDILIGLGLPWALQTLAVDYGSYIRLNSRGLIYSVGLLLASVFVTVFGVHL 600

  Fly   401 RRFVMGKTVGYLSIIFYALFLIIACTLE 428
            .::.:.|.:|...:..|.:||..:...|
  Rat   601 NKWQLDKKLGCGCLFLYGVFLCFSIMTE 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 160/508 (31%)
Na_Ca_ex 62..199 CDD:279963 69/137 (50%)
Na_Ca_ex 276..424 CDD:279963 63/149 (42%)
Slc24a3NP_445957.2 TIGR00367 111..604 CDD:273039 156/492 (32%)
Na_Ca_ex 112..254 CDD:279963 70/141 (50%)
Na_Ca_ex 474..626 CDD:279963 63/151 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338072
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.950

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