DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12061 and Slc24a2

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_113931.1 Gene:Slc24a2 / 84550 RGDID:628650 Length:670 Species:Rattus norvegicus


Alignment Length:532 Identity:144/532 - (27%)
Similarity:238/532 - (44%) Gaps:155/532 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RQKSWIAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMTYDVAGATFLAASTSAPELFVN 114
            |:|.  ||::..:..:|:|:.||||||::.||::..:...|.::.|||||||:||..||||||.:
  Rat   131 RRKG--AIILHVIGMIYMFIALAIVCDEFFVPSLTVITEKLGISDDVAGATFMAAGGSAPELFTS 193

  Fly   115 FVGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFTQP-TKLDWWPVTRDTAWYLIAIASLTYVLW 178
            .:|.|:.:.::|:||||||:|||||.:.|:|.:|::. ..|.|||:.||.::|::.:..|.....
  Rat   194 LIGVFIAHSNVGIGTIVGSAVFNILFVIGMCALFSREILNLTWWPLFRDVSFYIVDLIMLIIFFL 258

  Fly   179 DSLVMWYEAFALLLLYISYVIQLSFDRRIQ----------------------------------- 208
            |:::||:|:..||..|.:||:.:.|:.:::                                   
  Rat   259 DNVIMWWESLLLLTAYFAYVVFMKFNVQVERWVKQMINRNKVVKVTVSEAQAKASTAGDKEEPTL 323

  Fly   209 -----------------NLVRHE------HAESELLDE----------DPMTR------------ 228
                             :|:|:.      |....|.:|          |.||.            
  Rat   324 PNKPRLQRGGSSASLHNSLMRNSIFQLMIHTLDPLAEELGSYGKLKYYDTMTEEGRFREKASILH 388

  Fly   229 ----------EEEPLKGFRDHV------------------------CAKPKTEYNF--------- 250
                      |.|...|..:||                        .::|....|.         
  Rat   389 KIAKKKCQVDENERQNGAANHVDYAAEKIELPNSTSTEVEMTPSSEASEPVQNGNLSHSIEAADA 453

  Fly   251 --------------YQWTW---------WAIKYPAELMLACTVPSAR-----SIFFLSMISAILW 287
                          ...:|         :.|..|....|..|:|..|     ..|.::...:|.|
  Rat   454 PQATETAEEDDDQPLSLSWPSNTRKQITFLIVLPIVFPLWITLPDVRKPASKKFFPITFFGSITW 518

  Fly   288 ISLISYLLTWFLTILGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKGYGSMAICNAIGSNTF 352
            |::.|||:.|:...:|..:.|.:.|||||:||||||:|::.:|.||::||.|.||:.:::|||.|
  Rat   519 IAVFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIF 583

  Fly   353 DILVCLGLPWLLKILIYQQK-IDIDSTALTITTAMLVVTAAVLYLGLLARRFVMGKTVGYLSIIF 416
            ||.|.|.|||||..:|::.| :.:.|..|.....:|.:....:.|.:...::.|.|.:|::....
  Rat   584 DITVGLPLPWLLYTIIHRFKPVTVSSNGLFCAIVLLFIMLIFVILSIALCKWRMNKILGFIMFGL 648

  Fly   417 YALFLIIACTLE 428
            |..||:::..||
  Rat   649 YFAFLVVSVLLE 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 137/513 (27%)
Na_Ca_ex 62..199 CDD:279963 59/137 (43%)
Na_Ca_ex 276..424 CDD:279963 55/148 (37%)
Slc24a2NP_113931.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 67..86
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..122
TIGR00367 138..652 CDD:273039 136/513 (27%)
Na_Ca_ex 139..281 CDD:279963 60/141 (43%)
Alpha-1 175..215 23/39 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 312..335 0/22 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 394..414 5/19 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 450..471 0/20 (0%)
Na_Ca_ex 507..658 CDD:279963 55/150 (37%)
Alpha-2 550..581 15/30 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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