DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12061 and CCX4

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_564650.1 Gene:CCX4 / 841851 AraportID:AT1G54115 Length:644 Species:Arabidopsis thaliana


Alignment Length:509 Identity:98/509 - (19%)
Similarity:170/509 - (33%) Gaps:180/509 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 LFVILAIVCDDYLVPAMERLCYTLRMTYDVAGATFLAASTSAPELFVN---FVGTFVTNGDIGLG 128
            ||.:|.....||...::|:|...||:...|||.|.|.....||::|.:   |||:  ..|::||.
plant   147 LFYLLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGS--DKGEVGLN 209

  Fly   129 TIVGSSVFNILVIAGVCG--IFTQPTKLDWWPVTRDTAWYLIAIASLTYVLWDSLVMWYEAFALL 191
            :::|.:||...|:.|:..  :..:..|:|.....||.:::|..:.:|..:|....|....|.|.:
plant   210 SVLGGAVFVTCVVVGIVSLCVADKEVKIDKKCFIRDLSFFLFTLVALMVILMVGKVTVGIAIAFV 274

  Fly   192 LLYISYVIQLSFDRRIQNLVRHEHAESELLD-------------EDPMTREEEPL---------- 233
            .:|:.|...::     .|.:..:|:....||             ..|...|:.|:          
plant   275 SIYVFYASLVA-----ANEILRKHSRRLKLDSITPLLPMQGSVFSSPSVEEDIPMYSPLMELDTG 334

  Fly   234 KGFRDHVCAKPKTEYNFYQWTW-------------------------WA---------------- 257
            :|       .|:...:..||.|                         |.                
plant   335 EG-------PPRLHDSLPQWMWATNVAIYSNHFAKANVHDEERPPWGWTEDGAEVESSLCSKITS 392

  Fly   258 -IKYPAELMLACTVP-----------SARSIFFLSMISAILWIS---------LISYL------- 294
             ::.|..:....|:|           :..|:....::.:.||.|         :::|.       
plant   393 LLETPLTVPRRLTIPLIEEDSWSKTYAVASVSLAPVLLSFLWSSQDDTSLQARIVAYFIGIAIGS 457

  Fly   295 -------------------------------LTWFLTILG------------YNLNIPDAIMGLT 316
                                           :.||..|..            |.:|  .:|:|||
plant   458 TLGYLAFKNTEPDRPPQIYLIPWVLGGFIMSIVWFYMIANELVALLVTFGGIYGIN--PSILGLT 520

  Fly   317 VLAAGTSVPEVASSYIVSKKGYG--SMAICNAIGSNTFDILVCLGL-----PWLLKILIYQQKID 374
            |||.|.|:.::.|:..:|..|..  .:|:........|:.||.||:     .|......|.  |.
plant   521 VLAWGNSMGDLVSNIALSMNGGDGVQIALSGCYAGPMFNTLVGLGMSMFLGAWSKSPETYM--IP 583

  Fly   375 IDSTALTITTAMLVVTAAVLYLGLLARRFVM-------GKTVGYLSIIFYALFL 421
            .|::        |..|...|..||:....::       .|.:|...|..|.:|:
plant   584 EDNS--------LFYTLGFLIFGLIWSLVMLPRNEMRPNKVMGIGLITLYLIFV 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 98/509 (19%)
Na_Ca_ex 62..199 CDD:279963 40/136 (29%)
Na_Ca_ex 276..424 CDD:279963 41/219 (19%)
CCX4NP_564650.1 PLN03151 1..644 CDD:215604 98/509 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 70 1.000 Domainoid score I3391
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I1830
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

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