DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12061 and AT5G17850

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001318589.1 Gene:AT5G17850 / 831653 AraportID:AT5G17850 Length:559 Species:Arabidopsis thaliana


Alignment Length:461 Identity:105/461 - (22%)
Similarity:177/461 - (38%) Gaps:103/461 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 MYLFVILAIVCDDYLVPAMERLCYTLRMTYDVAGATFLAASTSAPELF---VNFVGTFVTNGDIG 126
            :.||.:|.....:|...::|.|...|.::..|||.|.|:....||:||   |:|:|......|:|
plant   100 LLLFYLLGHTASEYFCSSLESLSKLLNLSPTVAGVTLLSLGNGAPDLFASLVSFMGESKGTYDVG 164

  Fly   127 LGTIVGSSVFNILVIAGVCGI--FTQPTKLDWWPVTRDTAWYLIAIASLTYVLWDSLVMWYEAFA 189
            |.|:||.|.|...|:.|:..|  ..:..:::.....||..::..||.||..:|....:.::.|..
plant   165 LNTVVGGSGFVTCVVVGIISISLHKRRVRIERAAFIRDICFFCAAIGSLALILVYGKINFWGALG 229

  Fly   190 LLLLYISYV--IQLSF--------DRRIQNLVRHEHAESELLDEDPMTREEEPLKGFRDHVCAKP 244
            ...||..||  :.||:        :..::::.:.......:|..|.:...|:.:......:....
plant   230 FCSLYAVYVAFVVLSWRFGGDQGAESDLESIHKRGSLSEPILQRDGLEEIEDGVVNGEHQIVDDD 294

  Fly   245 KTEYNFYQW---TWWAIKYPAELMLACTVP-----------SARSIFFLSMISAILW-------- 287
            .....:|.|   ..|||..|..|....|:|           :..|:.|..::.:.||        
plant   295 DDHQRYYYWKRLVIWAITLPLNLPRILTIPVVSEDKWSKPLAVASVTFAPVLLSFLWNWKRKPTS 359

  Fly   288 -----ISLISYL----------------------------------LTW----------FLTILG 303
                 :.||..|                                  :||          .||.||
plant   360 FEAGVVYLIGCLIGIALGFIAGATTKKLTPPKKWLLPWLAGGFVMSMTWSYISAQELVALLTSLG 424

  Fly   304 YNLNIPDAIMGLTVLAAGTSVPEVASSYIVS----KKGYGSMAICNAIGSNTFDILVCLGL---- 360
            |...:..:|:||||||.|.|:.::.::..::    .:| ..:|:........|:.|..||:    
plant   425 YIFGVSPSILGLTVLAWGNSIGDLITNLTMALHDGNEG-AQVAVSGCYAGPIFNTLFALGISLVG 488

  Fly   361 ----PWLLKILIYQQKIDIDSTALTITTAMLVVTAAVLYLGLLARRFVMGKTVGYLSIIFYALFL 421
                .:.|.|:|......::|  |....|.||.:..||:...:....|||  :|.|.|...:|.|
plant   489 CAWEAYPLSIVIKTDPRLLES--LGFLVAGLVWSFLVLFSNRMRLGGVMG--IGLLVIYLASLSL 549

  Fly   422 IIACTL 427
            .|..|:
plant   550 RIMQTV 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 102/454 (22%)
Na_Ca_ex 62..199 CDD:279963 42/140 (30%)
Na_Ca_ex 276..424 CDD:279963 46/216 (21%)
AT5G17850NP_001318589.1 PLN03151 34..556 CDD:215604 105/461 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 70 1.000 Domainoid score I3391
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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