DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12061 and MHX

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_566105.1 Gene:MHX / 819373 AraportID:AT2G47600 Length:539 Species:Arabidopsis thaliana


Alignment Length:467 Identity:88/467 - (18%)
Similarity:178/467 - (38%) Gaps:118/467 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 IVCDDYLVPAMERLCYTLRMTYDVAGATFLAASTSAPELFVNFVGTFVTNGD-----IGLGTIVG 132
            :|..|.:..| |.:.|.....:.:|..:.||..||.|::.:..:......|:     :|.||:||
plant    76 VVTIDPITKA-EVITYKKVWNFTIADISLLAFGTSFPQISLATIDAIRNMGERYAGGLGPGTLVG 139

  Fly   133 SSVFNILVIAGVCGIFTQPTKLDWWPVTRDTAWYLIAIASLTYVLWDSLVM--WYEAFALLLLYI 195
            |:.|::..|..||.:..:..:|.  .::....|.:..:.|....:|..:::  |......|:..:
plant   140 SAAFDLFPIHAVCVVVPKAGELK--KISDLGVWLVELVWSFWAYIWLYIILEVWSPNVITLVEAL 202

  Fly   196 SYVIQLSFDRRIQNLVRHEHAESELLD--EDPMTREEEPLK------------------------ 234
            ..|:|...      |:.|.:|:.:...  ..||:|.:.|.:                        
plant   203 LTVLQYGL------LLVHAYAQDKRWPYLSLPMSRGDRPEEWVPEEIDTSKDDNDNDVHDVYSDA 261

  Fly   235 -------------------------GFRDHVCA-----------KPKTEYNFYQWT--------- 254
                                     |...|..|           |.|....|..|.         
plant   262 AQDAVESGSRNIVDIFSIHSANNDTGITYHTVADTPPDSATKKGKAKNSTVFDIWKHQFVDAITL 326

  Fly   255 -------------------WWAIKYPAELMLACTVPSARSIFFLSMISAILWISLISYLLTWFLT 300
                               |..:..|.:|:.|...|...:..:::.|.::|:||.:::::|.|..
plant   327 ETSESKKVDSIYLRIAKSFWHLLLAPWKLLFAFVPPCNIAHGWIAFICSLLFISGVAFVVTRFTD 391

  Fly   301 ILGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKGY-GSMAICNAIGSNTFDILVCLGLPWLL 364
            ::.....|...::..|.||:|||.|::.:|.|.:::.. ...||.|...||:.:|.|.:|:|||:
plant   392 LISCVTGINPYVIAFTALASGTSWPDLVASKIAAERQLTADSAIANITCSNSVNIYVGIGVPWLI 456

  Fly   365 KIL----IYQQKIDIDST-ALTITTAMLVVTAAVLYLGLLARRFVMGKTVG------YLSIIFYA 418
            ..:    .|::.:.|::. .|:.:..:...|:....:.|:.||.::|..:|      :|:..::.
plant   457 NTVYNYFAYREPLYIENAKGLSFSLLIFFATSVGCIVVLVLRRLIIGAELGGPRLWAWLTSAYFM 521

  Fly   419 LFLIIACTLEIL 430
            :..::...|..|
plant   522 MLWVVFVVLSSL 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 86/457 (19%)
Na_Ca_ex 62..199 CDD:279963 28/132 (21%)
Na_Ca_ex 276..424 CDD:279963 37/159 (23%)
MHXNP_566105.1 caca 12..>221 CDD:273296 33/153 (22%)
caca <316..539 CDD:273296 45/218 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.