DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12061 and slc24a3

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_012818629.1 Gene:slc24a3 / 780317 XenbaseID:XB-GENE-958238 Length:685 Species:Xenopus tropicalis


Alignment Length:549 Identity:174/549 - (31%)
Similarity:262/549 - (47%) Gaps:157/549 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RNCTLPAIVEFP-----NLMRQKSWIAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMTY 94
            :|||.||:.|||     |..|:..  |:::..|.:||:|..|||||||:.||::|::...|:::.
 Frog   124 KNCTEPALHEFPDDIFSNEDRRHG--AVILHVLFAMYMFYALAIVCDDFFVPSLEKISERLQLSE 186

  Fly    95 DVAGATFLAASTSAPELFVNFVGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFT-QPTKLDWWP 158
            |||||||:||.:||||||.:.:|.|:|.||:|:||||||:|||||.|.||||:|. |...|..|.
 Frog   187 DVAGATFMAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFAGQVVVLSAWC 251

  Fly   159 VTRDTAWYLIAIASLTYVLWDSLVMWYEAFALLLLYISYVIQLS--------FDRR---IQNLVR 212
            :.||..:|.:::.:|...::|..|.|:|:..|:::|..|::.:.        |:||   ..||..
 Frog   252 LLRDATYYTLSVIALIVFIYDEKVSWWESLILVMMYAVYILIMKYNSSIHQFFERRKKSAANLAN 316

  Fly   213 HEHAESEL--------------------------LDE------------------------DPMT 227
            ...|.|||                          :||                        .|.|
 Frog   317 GLTANSELDDSVHCEATMVLLNKGNCNRKTSVIMVDELLSAYPHQLSFSEAGLRIMITSHFPPKT 381

  Fly   228 R------------------------EEE-----PLK-------------------GFRDHVC-AK 243
            |                        |.|     |:|                   ..||.|. |.
 Frog   382 RLSMASRMLINERQRLINSRAYVNGESEVSIKIPIKHAVENGTGPGNSTERNGNSNRRDDVAEAG 446

  Fly   244 PKTEY--------------------NFYQWT------------WWAIKYPAELMLACTVPSA--- 273
            .:||.                    |...:|            .|.:.:|..|:|..|||:.   
 Frog   447 NETENENEDNENNENDEEEEEEEDDNDGPFTPFEVPSGNADKVKWMVTWPLCLLLYFTVPNCAKP 511

  Fly   274 --RSIFFLSMISAILWISLISYLLTWFLTILGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKK 336
              ...|.::.:|:.:||:.:||::.|.:||:|:.|.|||.|||:|.||||||||:..:|.||:::
 Frog   512 RWEKWFMVTFVSSSMWIAALSYVMVWMVTIIGFTLGIPDVIMGITFLAAGTSVPDCMASLIVARQ 576

  Fly   337 GYGSMAICNAIGSNTFDILVCLGLPWLLKILI--YQQKIDIDSTALTITTAMLVVTAAVLYLGLL 399
            |.|.||:.|:||||.||||:.|||||.|:.|.  |...|.::|..|..:.|:|:.:..|...|:.
 Frog   577 GMGDMAVSNSIGSNVFDILIGLGLPWALQTLAVDYGSYIQLNSRGLIYSVALLLASLFVTVCGVR 641

  Fly   400 ARRFVMGKTVGYLSIIFYALFLIIACTLE 428
            ..::.:.|.:|...::.|.:||.::...|
 Frog   642 FNKWRLDKKLGVACLLLYGVFLCLSILTE 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 161/510 (32%)
Na_Ca_ex 62..199 CDD:279963 67/137 (49%)
Na_Ca_ex 276..424 CDD:279963 62/149 (42%)
slc24a3XP_012818629.1 2A1904 <129..670 CDD:273344 170/542 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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