DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12061 and slc24a5

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001025451.1 Gene:slc24a5 / 570312 ZFINID:ZDB-GENE-031210-1 Length:513 Species:Danio rerio


Alignment Length:455 Identity:145/455 - (31%)
Similarity:242/455 - (53%) Gaps:57/455 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 MRYDID-ARNCTLPAIVEFPN---LMRQKSWIAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCY 88
            :|.|:: |..|..|...|||.   .::::....|::..::..|:.:.::||||:|.:|::|.:..
Zfish    48 VRRDLENASECVQPQSSEFPEGFFTVQERKDGGILIYFMIIFYMLLSVSIVCDEYFLPSLEVISE 112

  Fly    89 TLRMTYDVAGATFLAASTSAPELFVNFVGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFTQPT- 152
            .|.::.|||||||:||.:|||||...|:|.|||.||||:.||:||:|:|:|.|...||:.:... 
Zfish   113 RLGLSQDVAGATFMAAGSSAPELVTAFLGVFVTKGDIGVSTIMGSAVYNLLCICAACGLLSSAVG 177

  Fly   153 KLDWWPVTRDTAWYLIAIASLTYVLWDSLVMWYEAFALLLLYISYVIQLSFDRRIQNLVRHEHAE 217
            :|..||:.||...|.|::|::..::.|:.|.||:...|||:|..||..|.||.||...|....:.
Zfish   178 RLSCWPLFRDCVAYAISVAAVIAIISDNRVYWYDGACLLLVYGVYVAVLCFDLRISEYVMQRFSP 242

  Fly   218 S--ELLDEDPMTREEEPLKGFRD----HVCAKPKTEYNFYQ------------------------ 252
            .  .|...|..:.|::||.|:.|    .|..:.:.:...:|                        
Zfish   243 CCWCLKPRDRDSGEQQPLVGWSDDSSLRVQRRSRNDSGIFQDDSGYSHLSLSLHGLNEISDEHKS 307

  Fly   253 ----------WTWWAIKYPAELMLACTVPSAR-----SIFFLSMISAILWISLISYLLTWFLTIL 302
                      ...|.:..|...:|..:||..|     :.:.|:.:.:.:|||..:|:|.|.:||:
Zfish   308 VFSMPDHDLKRILWVLSLPVSTLLFVSVPDCRRPFWKNFYMLTFLMSAVWISAFTYVLVWMVTIV 372

  Fly   303 GYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKGYGSMAICNAIGSNTFDILVCLGLPWLLKIL 367
            |..|.|||.:||:|:||||||:|:..:|.:|:::|...||:.|.:|||.||:| ||||||.::.:
Zfish   373 GETLGIPDTVMGMTLLAAGTSIPDTVASVMVAREGKSDMAMSNIVGSNVFDML-CLGLPWFIQTV 436

  Fly   368 IYQ--QKIDIDSTALTITTAMLVVTAAVLYLGLLARRFVMGKTVGYLSIIFYALFLIIACTLEIL 430
            ...  ..::::|:.|...:..|:::...|:|.:....:.:...:|.:.:..|.||    .||.||
Zfish   437 FVDVGSPVEVNSSGLVFMSCTLLLSIIFLFLAVHINGWKLNWKLGLVCLACYILF----ATLSIL 497

  Fly   431  430
            Zfish   498  497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 132/408 (32%)
Na_Ca_ex 62..199 CDD:279963 59/137 (43%)
Na_Ca_ex 276..424 CDD:279963 51/149 (34%)
slc24a5NP_001025451.1 ECM27 81..497 CDD:223604 135/420 (32%)
Na_Ca_ex 84..228 CDD:279963 61/143 (43%)
Na_Ca_ex 346..497 CDD:279963 53/155 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 1 1.000 - - oto40719
orthoMCL 1 0.900 - - OOG6_106315
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.820

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