DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12061 and slc24a6a

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_009289475.1 Gene:slc24a6a / 561209 ZFINID:ZDB-GENE-100922-39 Length:639 Species:Danio rerio


Alignment Length:552 Identity:163/552 - (29%)
Similarity:256/552 - (46%) Gaps:162/552 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 AIVEFPN---LMRQKSWIAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMTYDVAGATFL 102
            ||.|||.   ...|:...||::....::|:|..||||||.:.||::|::|..|.::.|||||||:
Zfish    88 AIHEFPQDIFTKGQRRHGAILLHVFCAVYMFYALAIVCDVFFVPSLEKICENLHLSEDVAGATFM 152

  Fly   103 AASTSAPELFVNFVGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFT-QPTKLDWWPVTRDTAWY 166
            ||.:||||||.:.:|.|:|.||:|:||||||:|||||||.||||||. |...|.|||:.||:.:|
Zfish   153 AAGSSAPELFTSLIGVFITKGDLGVGTIVGSAVFNILVIIGVCGIFAGQTITLTWWPLFRDSIFY 217

  Fly   167 LIAIASLTYVLWDSLVMWYEAFALLLLYISYVIQLSFDRRIQNLVRHE----------------- 214
            ::::.:|..:::|..|:|:|...|:.:|..|::.:.|:.:|...|...                 
Zfish   218 ILSVLALILIIYDEKVIWWETIILISMYGVYILIMKFNSQIWGWVEQRFGIPGQPCLVSSLRRDV 282

  Fly   215 -------HAESELL------------------DE------------------------DPMTR-- 228
                   |.::.::                  ||                        .|.||  
Zfish   283 SVGEASPHCDTSMILLKKGQNAGGQDSPVVMVDELMSLHPHQFSFSEASLRVMITPHFSPRTRLS 347

  Fly   229 -----------------------------------------------------EEEPLK------ 234
                                                                 |.:||:      
Zfish   348 MAGRMLITERQRLIRNRSPGDSSGSGAGDTPGQDGPGMEAVPWGLENGGALESETQPLEEPRRRS 412

  Fly   235 --GFRDHVC----AKPK---------TEYNFYQWT-----W----WAIKYPAELMLACTVPSA-- 273
              |..:.|.    .:||         .|..|..:|     |    |...:|...:|..|||:.  
Zfish   413 QGGELERVADIEDTQPKDDEEDEEEADEEPFRPFTVPEGRWEQAKWMFSWPLSCLLYYTVPNCVL 477

  Fly   274 ---RSIFFLSMISAILWISLISYLLTWFLTILGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSK 335
               ...|.::.:::.|||::.|||:.|.:||:.:.|:|||.:||:|.||||||||:..:|.||::
Zfish   478 PRWERWFMVTFVASTLWIAVFSYLMVWMVTIISFTLDIPDVVMGITFLAAGTSVPDCMASLIVAR 542

  Fly   336 KGYGSMAICNAIGSNTFDILVCLGLPWLLKILI--YQQKIDIDSTALTITTAMLVVTAAVLYLGL 398
            :|.|.||:.|:||||.||||:.||.||.|:.|:  |...:.|:|..|..:..:|:.:..:..|.:
Zfish   543 QGMGDMAVSNSIGSNIFDILLGLGFPWALRTLVVDYGSTVSINSKGLVYSVILLLASVFLTVLSV 607

  Fly   399 LARRFVMGKTVGYLSIIFYALFLIIACTLEIL 430
            ....:.:.:.:|...:..||:||:.:...|.|
Zfish   608 HLNHWRLDRRLGLGLMFLYAIFLLCSICFEKL 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 152/519 (29%)
Na_Ca_ex 62..199 CDD:279963 69/137 (50%)
Na_Ca_ex 276..424 CDD:279963 58/149 (39%)
slc24a6aXP_009289475.1 Na_Ca_ex <85..637 CDD:332332 161/548 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577437
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

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