DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12061 and Nckx30C

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster


Alignment Length:565 Identity:149/565 - (26%)
Similarity:244/565 - (43%) Gaps:172/565 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 NCTLPAIVEFPNLMRQKSWI---AIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMTYDVA 97
            |.|......||..:..|..:   |:::..:..:|:||.||||||::.||:::.:...|.:|.|||
  Fly   309 NSTTTKTPLFPKDLFTKEQLENGAVILHIIGVIYMFVALAIVCDEFFVPSLDVIIEKLGITDDVA 373

  Fly    98 GATFLAASTSAPELFVNFVGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFTQPT-KLDWWPVTR 161
            ||||:||..||||||.:.:|.||:..|:|:||||||:|||||.:.|:|.:|::.. .|.|||:.|
  Fly   374 GATFMAAGGSAPELFTSVIGVFVSFDDVGIGTIVGSAVFNILFVIGMCALFSKTVLSLTWWPLFR 438

  Fly   162 DTAWYLIAIASLTYVLWDSLVMWYEAFALLLLYISYVIQLSFDRRIQNLVRH------------- 213
            |.::|.|::..|.|...|:.:.|:||..|..:||.||..:.::.:::..|:.             
  Fly   439 DCSFYSISLLVLIYFFRDNRIFWWEALILFTIYIGYVAFMKWNVQVETCVKKMITKNKVTRVRST 503

  Fly   214 --------------------------EHAESELLDEDP--------------------------- 225
                                      ..|.||.....|                           
  Fly   504 DQLMPAGNAANSSETSMATQPGGSVTSRAASETRSGPPGSSNAGATGNSSGGGGTSGSTQTGAKF 568

  Fly   226 -------MTREEEPL-------KGFRDHVCA---------KPK-----------TEYNFYQWT-- 254
                   |....:||       |..:.|..|         ||:           .:.|..:.|  
  Fly   569 RHGLLQLMIHTIDPLHDGKVDEKATQLHAIASLKVLLDATKPQRGGATTSAANHVKINLKETTLA 633

  Fly   255 ----------------------W-----------WAIKYP------------------------- 261
                                  |           ::||.|                         
  Fly   634 DRPNGNIDTTLDSPSLSGRRPSWIEQRVKIQTRKFSIKAPEIEDEPEPLSMAWPDTARKRLTYVL 698

  Fly   262 -AELMLA--CTVPSARS-----IFFLSMISAILWISLISYLLTWFLTILGYNLNIPDAIMGLTVL 318
             |.|::.  .|:|..|:     .|.::.|.:|:||:..|||:.|:..:.|....||..:||||.|
  Fly   699 VAPLLVPMWLTLPDTRTPRGKRFFPVTFIGSIVWIAAFSYLMVWWANVAGDTARIPPEVMGLTFL 763

  Fly   319 AAGTSVPEVASSYIVSKKGYGSMAICNAIGSNTFDILVCLGLPWLLKILIYQQKIDIDSTALTIT 383
            |||||:|::.:|.||::||:|.||:.:::|||.||:.|.|.:||||..:||...::::|..:..:
  Fly   764 AAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPIPWLLYGIIYGAPVEVNSVGMVCS 828

  Fly   384 TAMLVVTAAVLYLGLLARRFVMGKTVGYLSIIFYALFLIIACTLE 428
            ..:|.:....:.:.:...|:.|.|.:|:...:.|..|:.::...|
  Fly   829 ITILFMMLVFVVMSIACFRWRMNKGLGFTMFLLYFAFVAVSLMFE 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 142/529 (27%)
Na_Ca_ex 62..199 CDD:279963 65/137 (47%)
Na_Ca_ex 276..424 CDD:279963 52/147 (35%)
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 66/143 (46%)
Na_Ca_ex 721..871 CDD:279963 52/149 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444754
Domainoid 1 1.000 70 1.000 Domainoid score I3391
eggNOG 1 0.900 - - E1_COG0530
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I1830
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 1 1.000 - - otm46991
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10846
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.900

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