DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12061 and CG1090

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001262252.1 Gene:CG1090 / 40551 FlyBaseID:FBgn0037238 Length:633 Species:Drosophila melanogaster


Alignment Length:534 Identity:148/534 - (27%)
Similarity:240/534 - (44%) Gaps:145/534 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 NCTLPAIVEFPNLMRQKSWI----AIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMTYDV 96
            |||.|||.:||..:..| |.    .:::..||:::.|..||||||:|.|.:::|||..|:::.||
  Fly    90 NCTPPAIEQFPQPLMNK-WARQHGGLILHILVAVFTFFGLAIVCDEYFVASLDRLCEELKLSPDV 153

  Fly    97 AGATFLAASTSAPELFVNFVGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFTQPT-KLDWWPVT 160
            |||||:||.:|||||....:|.|....|||:..::||:||||:.:..||.:.:... :|:|||:.
  Fly   154 AGATFMAAGSSAPELATVVIGVFFAKDDIGISGVIGSAVFNIMFVISVCALCSGTVCQLNWWPLV 218

  Fly   161 RDTAWYLIAIASLTYVLWDSLVMWYEAFALLLLYISYVIQLSFDRRIQN---------------- 209
            ||..:|.::|..:..::::.::..:|:..:||.|:.|.:.|.|:..::.                
  Fly   219 RDCFFYCVSILVMLIIIFNDVISCFESVVMLLCYVGYCVALHFNTELERWALGLNLPFKLPSKEE 283

  Fly   210 ---LVRHEH-------------AESELLDEDPMTREEEPLKGFRDHVCAKPKTEYN--------- 249
               ||.:::             .:.:...:|..||..:|...::|:....|..:.|         
  Fly   284 QSALVTYKNVPEGSYTQESVGQTQGQKATDDSETRSAKPQSDYQDYSDPNPTWDPNAAWGDESQP 348

  Fly   250 ------------------------------------------------------------FYQWT 254
                                                                        :|:.|
  Fly   349 NPVANPPPVDDWGMGHSGQENMGYHADQPESVVTGDGPPAAVKSGGQVVSTQATSAGGNDYYKST 413

  Fly   255 -----------------------WWAIKYPAELMLACTVPSARS---------IFFLSMISAILW 287
                                   .|.:.||...:...|:|..|.         .|.:||:    |
  Fly   414 DKQREPRRDPLLRPMEGGLPALVSWYVVYPIHFLCKKTMPDCRQEQYRNWYPFTFLMSMV----W 474

  Fly   288 ISLISYLLTWFLTILGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKGYGSMAICNAIGSNTF 352
            ||..||.:.|.:|::|..|.|||.:||||.:|||.|||:..||..|.|:|:|.||:.||||||.|
  Fly   475 ISFYSYFMVWMITVIGSTLAIPDTVMGLTFVAAGVSVPDALSSIAVIKEGFGDMAVSNAIGSNVF 539

  Fly   353 DILVCLGLPWLLKILIYQ--QKIDIDSTALTITTAMLVVTAAVLYLGLLARRFVMGKTVGYLSII 415
            ||||||||||.::..|.:  ..:::.|..|..:|..|..|...|.|......:.:.|.:|.:.::
  Fly   540 DILVCLGLPWFIQTAIIKPGSHVNVISKGLAYSTLSLFSTVVFLILSTHLNGWKLDKRLGIILMV 604

  Fly   416 FYALFLIIACTLEI 429
            :|..|:.:|...|:
  Fly   605 WYLFFITLASLYEL 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 136/496 (27%)
Na_Ca_ex 62..199 CDD:279963 55/137 (40%)
Na_Ca_ex 276..424 CDD:279963 62/149 (42%)
CG1090NP_001262252.1 TIGR00367 116..609 CDD:273039 135/496 (27%)
Na_Ca_ex 117..257 CDD:279963 55/139 (40%)
Na_Ca_ex 463..615 CDD:279963 63/155 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444757
Domainoid 1 1.000 70 1.000 Domainoid score I3391
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I1830
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 1 1.000 - - otm46991
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10846
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.990

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