DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12061 and CG5348

DIOPT Version :10

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_611156.3 Gene:CG5348 / 36877 FlyBaseID:FBgn0034156 Length:625 Species:Drosophila melanogaster


Alignment Length:574 Identity:111/574 - (19%)
Similarity:197/574 - (34%) Gaps:197/574 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 CTLPAIVEFPNLMRQKSWIAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMTYDVAGATF 101
            |.|..|.:|..::    :||:.|:  ....:.|:|....:.|..||::.:...|.|...:||.|.
  Fly    69 CDLKCINQFQEMI----FIALFVA--FCFQILVLLIYTINVYYSPALKAVSRFLHMNEHLAGVTL 127

  Fly   102 LAASTSAPELFVNF------VGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFTQPTKLDWWPVT 160
            :|...::.:.|.|.      |..|..|        :.|::| ::.|:|....:..|.|::.:...
  Fly   128 MAFGNTSADFFANLASVERHVPVFANN--------LSSALF-VITISGGLIFYISPFKMNSYETV 183

  Fly   161 RDTAWYLIAIASLTYVLW--DSLVMWYE--AFALLLLYISYVI--------------------QL 201
            ||..:.|:|...:.|..:  :...:.||  .|.:||:||||:|                    |.
  Fly   184 RDILFLLLATLLMDYFAYTTNHFALGYEFKFFIVLLVYISYIIINVADVYLLQKTIASTRTKMQK 248

  Fly   202 SFDR--------RIQNLVR-----HEHAESELLDED---PMTR---------------------- 228
            ..|.        ::|:|.|     .:....|:|::.   .:||                      
  Fly   249 LLDEKQTPEIALKLQDLERKLEYYSQDTRVEILEKSSSISITRIRYTTMRMIRNPRVSVNRRYTR 313

  Fly   229 ------EEEPLKG-FRDH-------------------------------VCAK--PKTEYNFYQW 253
                  .:...:| |||.                               :|..  |..:|...:.
  Fly   314 NMKLDYTQSKNQGIFRDFFLALRPIKCQAWKQAELLNRVLLLIRAPAVVICTLYIPLVDYEMEKH 378

  Fly   254 TW-------------------------------WAIKYPAELM-----LACTVPSARSIFF---- 278
            .|                               |.|.....|:     ...|||.|..|.|    
  Fly   379 GWNKLLNAINVVVNPALSISIFLSFMHRKGNFLWYISLQNTLIYGASSFVLTVPFAVFILFHART 443

  Fly   279 ------------LSMISAILWISLISYLLTWFLTILGYNLNIPDAIMGLTVLAAGTSVPEVASSY 331
                        :::..::..|.|.:..:...|.::|..|:|.|..||.||.|...::..:.::.
  Fly   444 DVPPSYHWVFTIMNLTGSMFLIFLCATEIDTVLEVIGNILSIDDNYMGATVKAFTGNLGTLFANT 508

  Fly   332 IVSKKGYGSMAICNAIGSNTFDILVCLGLPWLLKILIYQQ---------KIDIDSTALTITTAML 387
            .|:..||..||..:|||.:.|.|:|.......::.|:..:         :|......:.:.|.:|
  Fly   509 AVAIHGYPKMAFASAIGGSFFTIVVTGNTVAYVRSLVGNRSEHHMEEYGEIAFIFLNMALFTILL 573

  Fly   388 VVTAAVLYLGLLARRFVMGKTVGYLSIIFYALFLIIACTLEILLNKEKMCDIQD 441
            ..|.    ||..|||     ::|..||..|.::|:..    .|:::|.:....|
  Fly   574 WSTT----LGFFARR-----SMGLYSIGLYVVYLLFV----TLVHEEVIHSFSD 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 100/529 (19%)
CG5348NP_611156.3 Na_Ca_ex 86..>186 CDD:426387 24/110 (22%)
Na_Ca_ex 458..603 CDD:426387 38/157 (24%)

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