DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12061 and CG13223

DIOPT Version :10

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_610656.1 Gene:CG13223 / 36190 FlyBaseID:FBgn0033599 Length:527 Species:Drosophila melanogaster


Alignment Length:526 Identity:94/526 - (17%)
Similarity:182/526 - (34%) Gaps:133/526 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 HDMRYDIDARNC----TLPAIVEFPNLMRQKSW--------------IAIVVSTLVSMYLFVILA 72
            ||:   ::::.|    |.|..:...||.....|              .:::...|:::|:|.::.
  Fly     3 HDL---LESQKCKFVQTTPDCLINMNLFNYLGWHYCKVDVRNSFNSFWSVLGMFLITIYVFWMMQ 64

  Fly    73 IVCDDYLVPAMERLCYTLRMTYDVAGATFLAASTSAPELFVNFVGTFVTNGDIGLGTIVGSSVFN 137
            |...:|..|.:..:...|||....||.|.||.:..:|:.|........|:....| :.:..::|.
  Fly    65 ITIKNYFCPTLMVIADLLRMNESTAGVTVLAIANGSPDFFTAIASRVQTSKHSFL-SCMSQAMFL 128

  Fly   138 ILVIAGVCGIFTQPTKLDWWPVTRDTAWYLIAIASLTYV-LWDSLVMWYEAFALLLLYISYVIQL 201
            .:.:||:. |.|:|..:......||..:..:....:.|: .....:.|..|.....:::.||:..
  Fly   129 HIFVAGLV-ILTKPFNMRANTYLRDFGFLFLNTVYMDYIHKRPKGISWLAALPSAFIFVGYVVVA 192

  Fly   202 SFDR-----RIQNLVRHEHAESELLD-EDPMTREEEPLK-----------GFRD----------- 238
            ..|:     |||.:.:.:...:|.|. |:...::|.|||           |.|:           
  Fly   193 IVDQHLLIARIQKMEQRQLNVAEALQLEELKPQKEMPLKRQEIDRPSIGHGSRNKRIFRQFWNTV 257

  Fly   239 -----------------HVCAK-----------PKTEYNFYQWTWWAIKYPAELMLACT------ 269
                             ::..|           ||.:....|:.|..:.:..:::|..|      
  Fly   258 AEFDKDRFHRGTFLVKLYLIVKQPIDMLLRILIPKVDMEAPQYGWSKLLFNIQVVLVPTYIAYII 322

  Fly   270 -------------------VPSARSIFFLS-----------------MISAILWISLISYLLTWF 298
                               :|.|..||||:                 |.:..|...|.:.:...|
  Fly   323 VRGYSIAGLAVYMIALILMIPVATLIFFLTRTDTPPIFFRFTSGVGFMAAVFLIFCLTTEVNAMF 387

  Fly   299 LTILGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKGYGSMAICNAIGSNTFDILVCLGLPWL 363
            .| :...|.:.......|.:....|..::.::..::.:|:..||:.....:..|...|.|.||.:
  Fly   388 FT-MATILQVSQEFSLATAICWALSSNDLVANLSLAHQGWPRMAMTATFSAPVFASFVFLALPLV 451

  Fly   364 LKIL------IYQQKIDIDSTALTITTAMLVVTAAVLYLGLLARRFVMGKTVGYLSIIFYALFLI 422
            :...      |:..:.....|    ....|.|......|.:|...|.:.:..|:|.:.:|..|:.
  Fly   452 VNSFVNAPGNIFPTEGGFGET----VCIFLEVGMGFSMLSVLTTNFKLRRACGFLLVSYYIFFVG 512

  Fly   423 IACTLE 428
            :...||
  Fly   513 VLILLE 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 84/465 (18%)
CG13223NP_610656.1 PLN03151 10..522 CDD:215604 92/516 (18%)

Return to query results.
Submit another query.