DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12061 and CG14744

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001097232.2 Gene:CG14744 / 35858 FlyBaseID:FBgn0033324 Length:620 Species:Drosophila melanogaster


Alignment Length:610 Identity:115/610 - (18%)
Similarity:205/610 - (33%) Gaps:218/610 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 NEWEYY------------PFAYRHDMRYDIDARNCTLPAIVEFPNLMRQKSWIAIVVSTLVSMYL 67
            :|:.|:            |:.||..|...:.  :|  ..|:.|.|..|. .:.:|.:....:..|
  Fly    17 HEFHYFIKNMSCRAVMRLPYNYRCRMATQVS--DC--KRIINFFNYFRM-MYCSIDIDDKATEVL 76

  Fly    68 FVIL-AIVC-----------DDYLVPAMERLCYTLRMTYDVAGATFLAASTSAPELFVNFVGTFV 120
            |::| |.:|           ..|..|.::.:...|.|...:||.||||....:||:..|.:   .
  Fly    77 FMLLFAFICVAFLWLMSFNIGTYFSPVLKIISLKLHMNEYLAGVTFLAFGNCSPEIIANLM---P 138

  Fly   121 TNGDIGLGTIVGSSVFNILVIAGVCGIFTQPTKLDWWPVTRDTAWYLIAIASLTYV-LWDSLVMW 184
            ...|..:.||...:...|::::|....|.:|.:::.....||..:.|:.:..|.:| :.:..|..
  Fly   139 VRADAPIFTITVGNTLAIILLSGGTVCFLRPFRMNGHSTLRDLLFLLLGVEVLRFVMIKEGAVTL 203

  Fly   185 YEAFALLLLYISYVI------------------QLSF------------DRRIQNLV-------- 211
            .|...|.|:|:.||.                  :|.:            :.:|:.|:        
  Fly   204 GEGIVLFLIYVVYVAINIADLALLRYYIRKLRRELDYLEGLTPPPITEINAKIRKLISWEEQDDI 268

  Fly   212 ----------------------------------RHEHAESEL----LDE--------------- 223
                                              |.||.:.||    |.:               
  Fly   269 GIKDTTKYRRSRDTGNHFSNMTSSGYFVTPIPERRSEHVDYELNRTALHDSENPKNLQLFTEFFQ 333

  Fly   224 --DPMTREEEPLKGF--RDHVCAK-----------PKTEYNFYQWTW------------------ 255
              :|:..|...|.|:  |.::.|:           |..:|...:..|                  
  Fly   334 SLNPVDAEAWQLGGWSNRIYLIARCPLVFVLQLFIPVVDYEKIKHGWSKLLNCTQIVTNPFVVIT 398

  Fly   256 ------------W--AIKYPAELMLAC-TVPSARSI--------------------FFLSMISAI 285
                        |  .:.:...:...| |||.|..|                    ||.||::  
  Fly   399 LVHSGVSSVYKTWHITLDFSISMWSPCLTVPLAIVIFLHSRTDVPPSYHHLFIILTFFSSMVT-- 461

  Fly   286 LWISLISYLLTWFLTILGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKGYGSMAICNAIGSN 350
            ||:::..  |.....|:|...|:.::.|.:|..|...:.|::.::|.::.:|||.||....||..
  Fly   462 LWLAVTE--LEVLSEIVGIVFNLSESFMAVTFEAVSNATPDIIANYQLALQGYGRMAFAAIIGGP 524

  Fly   351 TFDILVCLGLPWLLKILIYQQKI-----------DI-DSTALTITTAMLVVTAAVLYLGLLARRF 403
            .|.|||.:.|.:     |:..::           |: |:..|     .||:|........:...|
  Fly   525 VFAILVSMSLAF-----IFNHRVREVGANSWVYGDLGDNCYL-----FLVITIVTTMWWSVTFDF 579

  Fly   404 VMGKTVGYLSIIFYALFLIIACTLE 428
            ...::.|....:.|..||:.|..:|
  Fly   580 HARRSAGVFLWLVYLQFLLYAVCVE 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 100/544 (18%)
Na_Ca_ex 62..199 CDD:279963 36/149 (24%)
Na_Ca_ex 276..424 CDD:279963 40/179 (22%)
CG14744NP_001097232.2 Na_Ca_ex 79..221 CDD:279963 35/144 (24%)
Na_Ca_ex 450..601 CDD:279963 39/164 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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