DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12061 and SLC24A2

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001362779.1 Gene:SLC24A2 / 25769 HGNCID:10976 Length:661 Species:Homo sapiens


Alignment Length:546 Identity:149/546 - (27%)
Similarity:249/546 - (45%) Gaps:152/546 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DARNCTLPAIVEFPNLM-----RQKSWIAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRM 92
            ::.|.|..|..::|..:     |:|.  ||::..:..:|:|:.||||||::.||::..:...|.:
Human   108 ESENSTDHAQGDYPKDIFSLEERRKG--AIILHVIGMIYMFIALAIVCDEFFVPSLTVITEKLGI 170

  Fly    93 TYDVAGATFLAASTSAPELFVNFVGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFTQP-TKLDW 156
            :.|||||||:||..||||||.:.:|.|:.:.::|:||||||:|||||.:.|:|.:|::. ..|.|
Human   171 SDDVAGATFMAAGGSAPELFTSLIGVFIAHSNVGIGTIVGSAVFNILFVIGMCALFSREILNLTW 235

  Fly   157 WPVTRDTAWYLIAIASLTYVLWDSLVMWYEAFALLLLYISYVIQLSFDRRIQ------------- 208
            ||:.||.::|::.:..|.....|:::||:|:..||..|..||:.:.|:.:::             
Human   236 WPLFRDVSFYIVDLIMLIIFFLDNVIMWWESLLLLTAYFCYVVFMKFNVQVEKWVKQMINRNKVV 300

  Fly   209 ---------------------------------------NLVRHE------HAESELLDE----- 223
                                                   :|:|:.      |....|.:|     
Human   301 KVTAPEAQAKPSAARDKDEPTLPAKPRLQRGGSSASLHNSLMRNSIFQLMIHTLDPLAEELGSYG 365

  Fly   224 -----DPMTR----------------------EEEPLKGFRDHV--------------------C 241
                 |.||.                      |.|...|..:||                    .
Human   366 KLKYYDTMTEEGRFREKASILHKIAKKKCHVDENERQNGAANHVEKIELPNSTSTDVEMTPSSDA 430

  Fly   242 AKPKTEYNF-------------------YQWTW---------WAIKYPAELMLACTV-----PSA 273
            ::|....|.                   ....|         :.|.:|....|..|:     ||:
Human   431 SEPVQNGNLSHNIEGAEAQTADEEEDQPLSLAWPSETRKQVTFLIVFPIVFPLWITLPDVRKPSS 495

  Fly   274 RSIFFLSMISAILWISLISYLLTWFLTILGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKGY 338
            |..|.::...:|.||::.|||:.|:...:|..:.|.:.|||||:||||||:|::.:|.||::||.
Human   496 RKFFPITFFGSITWIAVFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGL 560

  Fly   339 GSMAICNAIGSNTFDILVCLGLPWLLKILIYQ-QKIDIDSTALTITTAMLVVTAAVLYLGLLARR 402
            |.||:.:::|||.|||.|.|.|||||..:|:: |.:.:.|..|.....:|.:....:.|.:...:
Human   561 GDMAVSSSVGSNIFDITVGLPLPWLLYTVIHRFQPVAVSSNGLFCAIVLLFIMLLFVILSIALCK 625

  Fly   403 FVMGKTVGYLSIIFYALFLIIACTLE 428
            :.|.|.:|::....|.:||:::..||
Human   626 WRMNKILGFIMFGLYFVFLVVSVLLE 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 138/505 (27%)
Na_Ca_ex 62..199 CDD:279963 59/137 (43%)
Na_Ca_ex 276..424 CDD:279963 55/148 (37%)
SLC24A2NP_001362779.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 99..120 3/11 (27%)
2A1904 <115..661 CDD:273344 147/539 (27%)
Alpha-1 174..214 23/39 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 306..336 0/29 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..439 6/41 (15%)
Alpha-2 541..572 15/30 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.