DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12061 and SPOM_SPAC3A12.06C

DIOPT Version :10

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_593332.1 Gene:SPOM_SPAC3A12.06C / 2543183 PomBaseID:SPAC3A12.06C Length:743 Species:Schizosaccharomyces pombe


Alignment Length:656 Identity:119/656 - (18%)
Similarity:214/656 - (32%) Gaps:273/656 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 CTLPAIVEFPNLMRQKSWIAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMTYDVAGATF 101
            ||:.:: .||.|       :|:|..|:  :||:.:.|...|:....:..:.:.|::...|.|.||
pombe   102 CTINSL-RFPVL-------SIIVGWLI--FLFITIGISASDFFSTNLVTISWLLQLPDSVVGVTF 156

  Fly   102 LAASTSAPELFVNFVGTFVTNGDIGLGTIVGSSVFNILVIAG-VCGIFTQPTKLDWWPVTRDTAW 165
            ||....:|::...|....|.:|.:.:|.::||:.|.:.::|| ||.|  :|.|:......||.|:
pombe   157 LALGNGSPDILSTFAAVRVNSGGMAIGELLGSAFFIVAIVAGSVCLI--KPFKIPRRHFLRDVAF 219

  Fly   166 YL-IAIASLTYVLWD-SLVMWYEAFALLLLYISYVIQL--------------------------- 201
            .. ..:..:.:||.| ||.:| ::..::|.|:.||:.:                           
pombe   220 LTGTILLVIMFVLHDGSLSIW-QSLVMILYYLLYVLFVFFSGSSGVSVVITDENYLPVSLPVYSP 283

  Fly   202 ---SFD------------------------RRIQNL--------------VRHEHAES------- 218
               |||                        |:.|.:              .:|.|...       
pombe   284 VLNSFDDSDSYSSTDSELSEEAFLLPAQASRKTQKIHYINDNDPSNSYSSYQHSHVHDFIHKNNT 348

  Fly   219 ----------------ELL----------DEDPMTREEEPLK----------------------- 234
                            .||          ::.|..|..:||.                       
pombe   349 HSNRVLSQSSGPIVRPSLLAALDFRSSNEEQHPGLRSLDPLNIQDGDLTMHPMHIRHSQSDFYPS 413

  Fly   235 --------------GF---------------------RDHVCAKPK-------TEYNFYQWTWW- 256
                          ||                     .|.....|.       |..||.:.:|: 
pombe   414 GINTPVSGINYPNLGFSANNSVQSLVSEIFRHPTHTDEDFPLPSPSLSSLLFPTLRNFAKKSWYE 478

  Fly   257 ----AIKYPAELMLACTVP---------------------------------------------- 271
                .:..|:.|:....:|                                              
pombe   479 KLMDVLAVPSVLIFTLALPVYQCPRLAVDPIYHMDVSNCNPSKPTWSRKLRLLQCVFVPFAFVTF 543

  Fly   272 -----------SARSIFFLSMISAIL-------------WISLISYLL--TWFLTI--------- 301
                       :|.|:|.:..|:|:.             |:|.|.::|  .|..||         
pombe   544 SITGGNRLYIYAASSVFSILCITALYYYTDEEKPPKFLPWVSFIGFVLGIIWISTIANEVVGILR 608

  Fly   302 -LGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKGYGSMAICNAIGSNTFDILVCLGLPWLLK 365
             ||...|:.::|:||||.|||.|:.::.:..::::.|:..||:....|..|.:||:.:|:.....
pombe   609 ALGVIFNLNESILGLTVFAAGNSLSDLIADIMIARSGFPEMAMGGVFGGPTLNILIGIGISSFYS 673

  Fly   366 ILI---YQQKIDIDSTALTITTAMLVVTAAVLYLGLLARRFVMGKTVGYLSIIFYALFLIIACTL 427
            .:.   ....|:|.. :|:||...|:....:|.:.:...||.:.:.:|.|..|.|.:.......:
pombe   674 SISNHGNDSVIEIPH-SLSITAYFLLACLLLLLIYVPLNRFRVNRVLGLLLFILYIVGTSTNIVV 737

  Fly   428 EILLNK 433
            |:|.:|
pombe   738 ELLKDK 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 109/619 (18%)
SPOM_SPAC3A12.06CNP_593332.1 PLN03151 76..729 CDD:215604 116/640 (18%)

Return to query results.
Submit another query.