DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12061 and Slc24a1

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_659062.1 Gene:Slc24a1 / 214111 MGIID:2384871 Length:1130 Species:Mus musculus


Alignment Length:714 Identity:149/714 - (20%)
Similarity:246/714 - (34%) Gaps:333/714 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 PNLM----RQKSWIAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMTYDVAGATFLAAST 106
            |:|.    |::.|:.:.:..:  ||:||.||||||:|.|||:..:.:.|:::.|||||||:||..
Mouse   409 PDLFSVEDRRQGWVVLHIFGM--MYVFVALAIVCDEYFVPALGVITHKLQISEDVAGATFMAAGG 471

  Fly   107 SAPELFVNFVGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFTQP-TKLDWWPVTRDTAWYLIAI 170
            ||||||.:.:|.|:::.::|:||||||:|||||.:.|.|.:|::. ..|.|||:.||.::|::.:
Mouse   472 SAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALFSREILNLTWWPLFRDVSFYILDL 536

  Fly   171 ASLTYVLWDSLVMWYEAFALLLLYISYVIQLSFDRRIQNLVRHEHA------------------- 216
            :.|.....||.:.|:|:..|||.|..||..:.::::|:..|:.:.:                   
Mouse   537 SMLIVFFLDSFIAWWESLLLLLAYALYVFTMKWNKQIELWVKEQLSRRPVAKVMALGDLSKPSED 601

  Fly   217 ---ESELLDE-----------------------------------DPMTR--------------- 228
               |:|..|.                                   ||:..               
Mouse   602 AVEENEQQDSKKLKLPSVLTRGSSSASLHNSIIRNTIYHLMLHSLDPLGEARPSKDKQESLNQEA 666

  Fly   229 -------------EEEP---------------LKGFR--DHVC---------------------- 241
                         |:||               .||.:  |..|                      
Mouse   667 RVLSQTKAESSPDEDEPAELPAVTVTPAPAPDAKGDQEDDPGCQEDVDEAERRGEMTGEEGEKET 731

  Fly   242 ----------------------------------------------------------------- 241
                                                                             
Mouse   732 ETEGKKDEQEGETEAERKEDEQEEETEAEGKEQEGETEAEGKEDEQEGETEAEGKKDEQEGETEA 796

  Fly   242 ----------------------------------------------------------------- 241
                                                                             
Mouse   797 EGKEEQEGETEAEGKEDEQEGETEAEGKEEQEGETEAESKEVEQERETEAEGKDKHEGQGETQPD 861

  Fly   242 ------AKPKTEYN--------------------------------------------------- 249
                  .:.:||.|                                                   
Mouse   862 DTEVKDGEGETEANAEDQCEATQGEKGADGGGESDGGDSEEEEDEEDEEEEEEEDEEEEEEENEE 926

  Fly   250 --FYQW-------TWWAIKYPAELMLACTVP-----SARSIFFLSMISAILWISLISYLLTWFLT 300
              ..:|       ..:....|....|..|:|     .:|..|.::.:.:|:||::.|||:.|:..
Mouse   927 PLSLEWPDSRQKQAIYLFLLPIVFPLWLTIPDVRRQESRKFFVITFLGSIIWIAMFSYLMVWWAH 991

  Fly   301 ILGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKGYGSMAICNAIGSNTFDILVCLGLPWLLK 365
            .:|..:.|.:.|||||:||||||:|::.:|.||::||.|.||:.:::|||.|||.|.|.:||||.
Mouse   992 QVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWLLF 1056

  Fly   366 ILIYQ-QKIDIDSTALTITTAMLVVTAAVLYLGLLARRFVMGKTVGYLSIIFYALFLIIACTLE 428
            .||.. |.:.:.|..|.....:|.:....:...:.:.::.|.|.:|:...:.|.:||:|:..||
Mouse  1057 SLINALQPVPVSSNGLFCAIVLLFLMLLFVIFSIASCKWRMNKILGFTMFLLYFVFLVISVMLE 1120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 141/687 (21%)
Na_Ca_ex 62..199 CDD:279963 64/137 (47%)
Na_Ca_ex 276..424 CDD:279963 54/148 (36%)
Slc24a1NP_659062.1 2A1904 1..1130 CDD:273344 149/714 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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