DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12061 and ncx-5

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_505690.2 Gene:ncx-5 / 191715 WormBaseID:WBGene00003570 Length:656 Species:Caenorhabditis elegans


Alignment Length:590 Identity:155/590 - (26%)
Similarity:230/590 - (38%) Gaps:188/590 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 YRHDMRYDID-----------ARNCTLPAIVEFPNLMRQKSWIAIVVSTLVSMYLFVILAIVCDD 77
            :|..:.|:.|           |.:...||.: |....|::..:.:.:..|:  |:||.||:|||:
 Worm    58 HRRSVEYEFDDCRPRIQTTSNANSSQFPADI-FSLQTRRRGGVIVHIGLLI--YMFVALAVVCDE 119

  Fly    78 YLVPAMERLCYTLRMTYDVAGATFLAASTSAPELFVNFVGTFVTNGDIGLGTIVGSSVFNILVIA 142
            :.||::..:...|.::.|||||||:||..||||.|.:..|.||...::|:||||||:.||||.:.
 Worm   120 FFVPSLSVITEVLAISDDVAGATFMAAGGSAPEFFTSLFGVFVAQDNVGVGTIVGSATFNILCVL 184

  Fly   143 GVCGIFT-QPTKLDWWPVTRDTAWYLIAIASLTYVLWDSLVMWYEAFALLLLYISYVIQLSFD-- 204
            ..|.:|: |...|.|||:.||.::|.:::..|.....|.::.|.||..:..:||:|...:.|:  
 Worm   185 AFCTLFSRQVLHLTWWPLFRDMSFYTLSLFLLLIFFGDEVIEWQEALVMFSMYIAYGFFMKFNGF 249

  Fly   205 ---------------------------------RRIQNL-----------------VRHEHAESE 219
                                             |...:|                 ||...|:..
 Worm   250 LELKTKQFLFRKVGIGSEIAPETIVDAAAGCTPRSPHSLGAQGPRRSFPMIHGGQEVRKSIAQLV 314

  Fly   220 LLDED------------------------PMTREE--------------------------EPLK 234
            :.|||                        |..|:.                          .|:.
 Worm   315 IGDEDDTSSSSSSSSSERSNKIKPVSNGVPEIRQNGRTIMVKPANDPDAKFNNQNSIKTVITPID 379

  Fly   235 GFRDHVC-------AKPKTEYNFYQWT-------------------------------------- 254
            ...||..       .|.|...|....|                                      
 Worm   380 FGDDHTIVINNNNNGKRKNGNNGTYLTPVEAINPSNGHLELAQTNGNPVPPIALDNLSIASSTAE 444

  Fly   255 ------W---------WAIKYPAELMLACTV-----PSARSIFFLSMISAILWISLISYLLTWFL 299
                  |         :....|....||.|:     ||.|..|.::.|.|||||:..|||:.|:.
 Worm   445 KPLDLSWPEANHKKLIYLFLAPITFPLAYTLPDVRKPSLRKFFAITFIGAILWIAAYSYLMVWWA 509

  Fly   300 TILGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKGYGSMAICNAIGSNTFDILVCLGLPWLL 364
            ..:|....||..|||||:||||||:|::.:|.||::||.|.||:.::||||.||:.|.|.:|||:
 Worm   510 NTIGETFGIPTEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSIGSNLFDVCVGLPIPWLI 574

  Fly   365 KILI------YQQKIDIDSTALTITTAMLVVTAAVLYLGLLARRFVMGKTVGYLSIIFYALFLII 423
            ...|      ..|.|.:.|..|..:..:|.....||...:...|:.|.|..|.|.|..|..|.::
 Worm   575 HFAIGVFKSEPTQNISVTSNGLVCSLGLLFAMLIVLLTCVAISRWKMDKFFGLLMIFSYCGFCML 639

  Fly   424 ACTLE 428
            ...||
 Worm   640 CILLE 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 145/534 (27%)
Na_Ca_ex 62..199 CDD:279963 58/137 (42%)
Na_Ca_ex 276..424 CDD:279963 61/153 (40%)
ncx-5NP_505690.2 Na_Ca_ex 102..244 CDD:279963 58/143 (41%)
Na_Ca_ex 486..642 CDD:279963 61/155 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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