DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12061 and ncx-7

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_499147.3 Gene:ncx-7 / 176370 WormBaseID:WBGene00003572 Length:672 Species:Caenorhabditis elegans


Alignment Length:589 Identity:118/589 - (20%)
Similarity:206/589 - (34%) Gaps:227/589 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 IAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMTYDVAGATFLAASTSAPELF---VNFV 116
            |.|:|..:..:.||::::...||:..|::..:...||::..|||.||:|....||::|   .:.:
 Worm    89 ILIIVGVIYMLVLFIMVSSAADDFFSPSISSIVAHLRISESVAGVTFMAFGNGAPDVFGSIASVL 153

  Fly   117 GTFVTNGDIGLGTIVGSSVF-NILVIAGVCGIFTQPTKLDWWPVTRDTAWYLIAIASLT--YVLW 178
            .:.....|:.||.:.|..:| ..:|::.:  |.|.|..::.:...||..:||:|::.|.  :|.:
 Worm   154 SSPTPKADLALGELFGGGLFVTTMVVSTI--ILTSPFDVEVFSTIRDLLFYLVALSFLAFCFVFY 216

  Fly   179 DSLVMWYEAFALLLLYISYVIQLSFDRRIQNLVR------------------------------- 212
            :.:.:|. ....|.||:.|||.:...:.:.|..|                               
 Worm   217 NRVTLWM-PLTFLGLYLLYVITVIGAQAVHNRKRKALQKQNSTKSRKSIKSLRSRKSIHSVAPMP 280

  Fly   213 ---------------------------------------------------------------HE 214
                                                                           |.
 Worm   281 VIPEIEVHDQEAPFPEISVVTGAIDKLKEHMAEKAQTTRRYTKRASFMVNGDGNLNGLHPYATHN 345

  Fly   215 H-----AESELLDED--------------------------PMT----REEEPLKGFRDHVCAKP 244
            |     .||||.|||                          ||.    |.::.||...:|:..:|
 Worm   346 HLGISRRESELSDEDEEFVVIHGHVFQGHEARSRAASLVPEPMQIKSWRSKDILKDLAEHLDPRP 410

  Fly   245 KT----EYNFY----------------------QWTWWAIKYPAELMLACTVPS--ARSI-FFL- 279
            :.    |.|.:                      :.:|   ..|..|:.|.|.|:  ..|| ||| 
 Worm   411 EAEDWEEMNIFSKVMAYINVVPNLLFKLTIPLNEMSW---SKPLTLLHAFTCPAFLLFSIQFFLE 472

  Fly   280 ----------------SMISAIL----------------------------WISLISYLLTWFLT 300
                            |::.|||                            ||.|||..:...:|
 Worm   473 TPFSGSPGLWVYGLAVSIVLAILIMVFTELSVQPKYYKEIYSYSGFIMSIAWIYLISSEVVNVVT 537

  Fly   301 ILGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKGYGSMAICNAIGSNTFDILVCLGLPWLLK 365
            :||....:...::|||:||...|:.::.:...|.|:||..||:..|||...|::|:..|||:.: 
 Worm   538 MLGVVSRVSHEVLGLTILAWSNSIGDLIADVSVVKQGYPRMAMAAAIGGPLFNLLMGFGLPFTI- 601

  Fly   366 ILIYQQKIDIDSTALTI--TTAMLVVTAAVLYL----GLLARRFVMGKTVGYLSIIFYALFLIIA 424
                 .|:.....::||  |..:|::..|:..|    |:..::|.:.:....:.|..|..|::..
 Worm   602 -----AKLQGKYISMTINPTYRLLILFLAISLLATLIGIPVQKFRLQRPHAAVLISIYIAFIVFV 661

  Fly   425 CTLE 428
            ...|
 Worm   662 ILSE 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 114/575 (20%)
Na_Ca_ex 62..199 CDD:279963 37/142 (26%)
Na_Ca_ex 276..424 CDD:279963 48/199 (24%)
ncx-7NP_499147.3 PLN03151 56..671 CDD:215604 118/589 (20%)
Na_Ca_ex 96..240 CDD:279963 39/146 (27%)
Na_Ca_ex 513..663 CDD:279963 40/155 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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