DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12061 and SLC24A4

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_011534738.1 Gene:SLC24A4 / 123041 HGNCID:10978 Length:669 Species:Homo sapiens


Alignment Length:540 Identity:168/540 - (31%)
Similarity:264/540 - (48%) Gaps:152/540 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ARNCTLPAIVEFP-----NLMRQKSWIAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMT 93
            |:|||.|||.|||     |..||..  |:::..|.::|:|..|||||||:.||::|::|..|.::
Human   121 AKNCTDPAIHEFPTDLFSNKERQHG--AVLLHILGALYMFYALAIVCDDFFVPSLEKICERLHLS 183

  Fly    94 YDVAGATFLAASTSAPELFVNFVGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFT-QPTKLDWW 157
            .|||||||:||.:|.||||.:.:|.|:|:||:|:||||||:|||||.|.||||:|. |..:|.||
Human   184 EDVAGATFMAAGSSTPELFASVIGVFITHGDVGVGTIVGSAVFNILCIIGVCGLFAGQVVRLTWW 248

  Fly   158 PVTRDTAWYLIAIASLTYVLWDSLVMWYEAFALLLLYISYVIQLSFDRRI--------------- 207
            .|.||:.:|.|::..|...::|..::|:|...|::||:.|::.:.::.::               
Human   249 AVCRDSVYYTISVIVLIVFIYDEQIVWWEGLVLIILYVFYILIMKYNVKMQAFFTVKQKSIANGN 313

  Fly   208 ----------------------------------------------------------------- 207
                                                                             
Human   314 PVNSELEAGNDFYDGSYDDPSVPLLGQVKEKPQYGKNPVVMVDEIMSSSPPKFTFPEAGLRIMIT 378

  Fly   208 --------------------QNLV--------------RHEHAESELL----DEDPMTREE---- 230
                                |.|:              |||:.|:..:    .|||...:|    
Human   379 NKFGPRTRLRMASRIIINERQRLINSANGVSSKPLQNGRHENIENGNVPVENPEDPQQNQEQQPP 443

  Fly   231 --------EPLKGFRDHVCAKPKTEYNFYQW--TWWAIKYPAELMLACTVPSA-----RSIFFLS 280
                    ||::.......:.|:...:..:|  ||     |...:|..|:|:.     ...|.::
Human   444 PQPPPPEPEPVEADFLSPFSVPEARGDKVKWVFTW-----PLIFLLCVTIPNCSKPRWEKFFMVT 503

  Fly   281 MISAILWISLISYLLTWFLTILGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKGYGSMAICN 345
            .|:|.|||::.||::.|.:||:||.|.|||.|||:|.||||||||:..:|.||:::|.|.||:.|
Human   504 FITATLWIAVFSYIMVWLVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGLGDMAVSN 568

  Fly   346 AIGSNTFDILVCLGLPWLLKILI--YQQKIDIDSTALTITTAMLVVTAAVLYLGLLARRFVMGKT 408
            .||||.|||||.||:||.|:.::  |...:.|:|..|..:..:|:.:.|:..||:...::.:.:.
Human   569 TIGSNVFDILVGLGVPWGLQTMVVNYGSTVKINSRGLVYSVVLLLGSVALTVLGIHLNKWRLDRK 633

  Fly   409 VGYLSIIFYALFLIIACTLE 428
            :|...::.||:||..:..:|
Human   634 LGVYVLVLYAIFLCFSIMIE 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 152/500 (30%)
Na_Ca_ex 62..199 CDD:279963 69/137 (50%)
Na_Ca_ex 276..424 CDD:279963 64/149 (43%)
SLC24A4XP_011534738.1 TIGR00367 149..645 CDD:273039 151/500 (30%)
Na_Ca_ex 150..292 CDD:279963 69/141 (49%)
Na_Ca_ex 499..651 CDD:279963 64/151 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165144358
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.850

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