DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12061 and slc24a2

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_031746284.1 Gene:slc24a2 / 100494112 XenbaseID:XB-GENE-483618 Length:701 Species:Xenopus tropicalis


Alignment Length:576 Identity:142/576 - (24%)
Similarity:237/576 - (41%) Gaps:197/576 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 EFPNLM-----RQKSWIAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMTYDVAGATFLA 103
            |:|..:     |||.  |:::.....:|:|:.||:|||::.||::..:...|.::.|||||||:|
 Frog   122 EYPEDLFSLEERQKG--AVILHIFGMIYMFIALAVVCDEFFVPSLTVITEKLGISDDVAGATFMA 184

  Fly   104 ASTSAPELFVNFVGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFTQP-TKLDWWPVTRDTAWYL 167
            |..||||||.:.:|.|:::.::|:||||||:|||||.:.|:|.:|::. ..|.|||:.||.::|:
 Frog   185 AGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGMCALFSKEILNLTWWPLFRDVSFYI 249

  Fly   168 IAIASLTYVLWDSLVMWYEAFALLLLYISYVIQLSFDRRIQNLVR-------------------- 212
            :.:..|.....|:.:.|:|:..||:.|:.||..:.::.:::|.|:                    
 Frog   250 VGLIMLITFFLDNFIQWWESLLLLVAYLMYVTFMKYNVQVENFVKRKINRNKVVKVPSANTDGKD 314

  Fly   213 -------------HE-------------------------------------------------- 214
                         ||                                                  
 Frog   315 QPNILVESRVPPEHEGVAMDIRHGELNETAGLKETWTETATSPGKTKPRLQRGGSSASLHNSLMR 379

  Fly   215 --------HAESELLDE----------DPMTREEEPLKGFRD-----HVCAKPKTEYNFYQWTWW 256
                    |....|.:|          |.||.|.:    ||:     |..||.|.:....:....
 Frog   380 NSIFQLMIHTLDPLSEEIGAYGKLKYYDTMTEEGK----FREKASILHKMAKKKCQVEDSERLNG 440

  Fly   257 AIKY-----------------------------------------------------PAELMLAC 268
            |..|                                                     |..|....
 Frog   441 AASYTEKVDLPNTANVEFEVTPPKESTGPVQNGNVSHNTEAGETQIPAAEQTEEDDQPLSLAWPT 505

  Fly   269 TV-------------------------PSARSIFFLSMISAILWISLISYLLTWFLTILGYNLNI 308
            |:                         |::|..|.::...:|.||::.|||:.|:...:|..:.|
 Frog   506 TIRKQAAYLAVLPIVFPLWVTLPDVRNPNSRKFFPVTFFGSITWIAVFSYLMVWWAHQVGETIGI 570

  Fly   309 PDAIMGLTVLAAGTSVPEVASSYIVSKKGYGSMAICNAIGSNTFDILVCLGLPWLLKILIYQQ-K 372
            .:.|||||:||||||:|::.:|.||::||.|.||:.:::|||.|||.|.|.:||||..:.:.. .
 Frog   571 TEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPMPWLLYSVSHNMIP 635

  Fly   373 IDIDSTALTITTAMLVVTAAVLYLGLLARRFVMGKTVGYLSIIFYALFLIIACTLE 428
            :.:.|..|.....:|.:....:.|.:...::.|.|.:|......|.:||:::..||
 Frog   636 VAVSSNGLFCAIVLLFIMLLFVILSIAFCKWKMNKILGCTMFGLYFVFLVVSVLLE 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 133/546 (24%)
Na_Ca_ex 62..199 CDD:279963 57/137 (42%)
Na_Ca_ex 276..424 CDD:279963 52/148 (35%)
slc24a2XP_031746284.1 2A1904 <120..701 CDD:273344 142/576 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.