DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12061 and slc24a5

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_002936612.2 Gene:slc24a5 / 100490024 XenbaseID:XB-GENE-853669 Length:546 Species:Xenopus tropicalis


Alignment Length:454 Identity:139/454 - (30%)
Similarity:250/454 - (55%) Gaps:53/454 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 MRYDIDARN-CTLPAIVEFPN---LMRQKSWIAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCY 88
            :|.|::... |......|||.   ..:::....:::..|:.:|:|:.:||||:.|.:|::|.:..
 Frog    81 IRRDVENETLCIASPSSEFPEDFFTEQERKQGGLIIHFLIILYMFLAVAIVCESYFIPSLEVISE 145

  Fly    89 TLRMTYDVAGATFLAASTSAPELFVNFVGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFT-QPT 152
            .|.::.|||||||:|..:||||....|:|.|||.||||:.|||||:|:|:|.|...|.:.: ..:
 Frog   146 RLGLSQDVAGATFMAIGSSAPEFVTVFLGVFVTKGDIGVSTIVGSAVYNLLGICAACCLLSLSVS 210

  Fly   153 KLDWWPVTRDTAWYLIAIASLTYVLWDSLVMWYEAFALLLLYISYVIQLSFDRRIQNLVRHEHAE 217
            :|..||:.||...|.|::|::..:.:|:.:.|||:.:|:|:|..|::.:.||.||...:....:.
 Frog   211 RLTCWPLFRDCVAYAISVAAVIAITFDNRIYWYESASLILIYGIYIVTMCFDIRINQYIMRRFSP 275

  Fly   218 SELLDEDPM--TREEEPLKGFR-------------DHVCAKPKTEY------------------- 248
            ......:.|  ..|.|||.|::             |....:.:::|                   
 Frog   276 CCTCCREAMVGNTEHEPLLGWKEDSLPVIRRHSRSDSGIFQEESDYSQLSISLSGLKESSNNPPS 340

  Fly   249 ------NFYQWTWWAIKYPAELMLACTVPSAR-----SIFFLSMISAILWISLISYLLTWFLTIL 302
                  |..:...|.:..|...:|..|||..|     ::|.|:.:.:.:|||.::|:|.|.:|::
 Frog   341 VFTMPENDLKRIIWVLSLPIITLLYLTVPDCRRKRWKNLFILTFLMSAVWISAVTYILVWMVTVV 405

  Fly   303 GYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKGYGSMAICNAIGSNTFDILVCLGLPWLLKIL 367
            |..|:|||.:||||:||||||:|:..:|.:|:::|.|.||:.|.:|||.||:| |||:||.:|.:
 Frog   406 GETLSIPDTVMGLTLLAAGTSIPDTVASVLVAREGKGDMAMSNIVGSNVFDML-CLGVPWFIKTV 469

  Fly   368 IYQQK--IDIDSTALTITTAMLVVTAAVLYLGLLARRFVMGKTVGYLSIIFYALFLIIACTLEI 429
            ...:.  ::::|:.:|.||..|:.:...:::.:....:.:.|.:|.:.::.|.||:.::...|:
 Frog   470 FVDRSAPVEVNSSGITYTTISLLFSILFIFVAIHLNGWKLDKKLGVMCLLMYLLFVTLSILYEL 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 132/408 (32%)
Na_Ca_ex 62..199 CDD:279963 58/137 (42%)
Na_Ca_ex 276..424 CDD:279963 54/149 (36%)
slc24a5XP_002936612.2 2A1904 <95..>274 CDD:273344 65/178 (37%)
2A1904 <332..536 CDD:273344 63/203 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 1 1.000 - - oto104144
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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