DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12061 and slc24a1

DIOPT Version :9

Sequence 1:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_017947991.2 Gene:slc24a1 / 100488363 XenbaseID:XB-GENE-991430 Length:729 Species:Xenopus tropicalis


Alignment Length:583 Identity:147/583 - (25%)
Similarity:243/583 - (41%) Gaps:200/583 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 EFPNLM-----RQKSWIAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMTYDVAGATFLA 103
            |:|..:     |::.|:::.:..:  ||:||.||||||::.|||:..:...|:::.|||||||:|
 Frog   139 EYPEDLFSIEERRRGWVSLHIFGM--MYVFVALAIVCDEFFVPALGVITEKLQISEDVAGATFMA 201

  Fly   104 ASTSAPELFVNFVGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFTQP-TKLDWWPVTRDTAWYL 167
            |..||||||.:.:|.|:::.::|:||||||:|||||.:.|.|.:|::. ..|.|||:.||.::|:
 Frog   202 AGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALFSREILNLTWWPLFRDVSFYI 266

  Fly   168 IAIASLTYVLWDSLVMWYEAFALLLLYISYV--------------IQLSFDRR------------ 206
            :.:..|.....|:::.|:|:..|||.|..||              .|||..||            
 Frog   267 LDLIMLIIFFLDNVIQWWESMLLLLAYGLYVGFMKLNVQVERLVKGQLSKQRRLVKVMALEDTSK 331

  Fly   207 ----------------------------------------------------------------- 206
                                                                             
 Frog   332 KGNGAVAQDEPKPVEDNNRLRLKPFLTRGGSSASLHNSTMRSTIFQLMIHTLDPLGEASNLNQCR 396

  Fly   207 -------------------------------------------IQNLVRHE-----------HAE 217
                                                       :.|.|..|           .||
 Frog   397 PCYPENGAKFKDKAEIMNNLAKAKVETEAKKGLKAKDDKDETDVPNTVNVEVTPPTGSEPSGDAE 461

  Fly   218 SELLDEDPMTR--------------------------------------EEEPLKGFRDHVCAKP 244
            .|::|:|.:.|                                      :::..:|..:....:|
 Frog   462 DEVMDKDDIKRGRGEGGGGGDSSGSSGDESDDDSDDEDSDDDDDDDDDDDDDDGEGEEEEEADEP 526

  Fly   245 KT----EYNFYQWTW---WAIKYPAELMLA-CTVPSARSIFFLSMISAILWISLISYLLTWFLTI 301
            .:    |....|.|:   ..|.:|..|.|. ...|.:|:.|.|:.:.:|:||::.|||:.|:...
 Frog   527 LSLEWPETKRKQITYLFLLPIVFPLWLTLPDVRTPKSRNYFVLTFLGSIMWIAVFSYLMVWWAHQ 591

  Fly   302 LGYNLNIPDAIMGLTVLAAGTSVPEVASSYIVSKKGYGSMAICNAIGSNTFDILVCLGLPW-LLK 365
            :|..:.|.:.|||||:||||||:|::.:|.||::||.|.||:.:::|||.|||.|.|.:|| |..
 Frog   592 VGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWFLFS 656

  Fly   366 ILIYQQKIDIDSTALTITTAMLVVTAAVLYLGLLARRFVMGKTVGYLSIIFYALFLIIACTLE 428
            :......:.:.|..|.....:|.:....:...:.|.::.|.|.:|:...|.|.:|:|::..||
 Frog   657 VFNGFSPVPVSSNGLFCAIVLLFLMLLFVIFSIAACKWKMNKFLGFTMFILYFVFVIVSVMLE 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 140/553 (25%)
Na_Ca_ex 62..199 CDD:279963 63/151 (42%)
Na_Ca_ex 276..424 CDD:279963 53/148 (36%)
slc24a1XP_017947991.2 2A1904 <92..729 CDD:273344 147/583 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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