DRSC/TRiP Functional Genomics Resources

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Protein Alignment tyn and MATN4

DIOPT Version :9

Sequence 1:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001380459.1 Gene:MATN4 / 8785 HGNCID:6910 Length:581 Species:Homo sapiens


Alignment Length:513 Identity:95/513 - (18%)
Similarity:153/513 - (29%) Gaps:176/513 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TQSKSDRSSMHRGPLLLCAVMVVLVTLPEQINARMAFEKLTDFDF---------PGNT-----YY 54
            ||.:......|.|||.|    |.::.....:.. ..||.:..|..         |..|     .|
Human    19 TQLQLTGPRCHTGPLDL----VFVIDSSRSVRP-FEFETMRQFLMGLLRGLNVGPNATRVGVIQY 78

  Fly    55 SVKNLSLYECQGWCREEADCQAAAFSFVVNPLSPSQETHCQLQNDSSAANPSAAPQRSANMYYMI 119
            |.:..|::..:.:.|.| |.:.|....|  ||:....|...:|...:.|...|...|...     
Human    79 SSQVQSVFPLRAFSRRE-DMERAIRDLV--PLAQGTMTGLAIQYAMNVAFSVAEGARPPE----- 135

  Fly   120 KLQLRSENVCHRPWSFERVPNKVI--------------------RGLDNALIY--------TSTK 156
                            ||||...:                    ||::   ||        ..:.
Human   136 ----------------ERVPRVAVIVTDGRPQDRVAEVAAQARARGIE---IYAVGVQRADVGSL 181

  Fly   157 EACLSACLNERRFVCRSVE------YDYNNMKCVLSDSDRRSSGQFVQLVDAQGTDYFENLCL-- 213
            .|..|..|:|..|:..|.:      ..:.:..|.:.             :.|:||...|:.|:  
Human   182 RAMASPPLDEHVFLVESFDLIQEFGLQFQSRLCAID-------------LCAEGTHGCEHHCVNS 233

  Fly   214 ---------------KPAQACK--NNRSFGNSQKMGVSEEKVAQYVG--LHYYTDKELQVTSES- 258
                           :..::|:  :..||||.   ....|.|:...|  .|.....:||....| 
Human   234 PGSYFCHCQVGFVLQQDQRSCRAIDYCSFGNH---SCQHECVSTPGGPRCHCREGHDLQPDGRSC 295

  Fly   259 -----------ACRLACEIES---EFLCRSFLYLGQPQGSQY--------NCRLYHLDHKTLPDG 301
                       .|...|..|.   ..||        |:|.|.        .||..|:|...|.||
Human   296 QVRDLCNGVDHGCEFQCVSEGLSYRCLC--------PEGRQLQADGKSCNRCREGHVDLVLLVDG 352

  Fly   302 PST-----------YLNHERPLID---HGEPIG-QYFENQCEKAAGLGAGSPPGTLDKIDTLPVS 351
            ..:           ::|.....:|   .|..:| ..|.::......||.   .||..::....::
Human   353 SKSVRPQNFELVKRFVNQIVDFLDVSPEGTRVGLVQFSSRVRTEFPLGR---YGTAAEVKQAVLA 414

  Fly   352 LDTIEDPNLTNLTRNDVNCDKTGTCYDVSVHCKDTRIAVQVRTNKPFNGRIYALGRSE 409
            ::.:|...:|.|....:          |.....:.:.|.....|.|..|.::..|||:
Human   415 VEYMERGTMTGLALRHM----------VEHSFSEAQGARPRALNVPRVGLVFTDGRSQ 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tynNP_001027032.1 PAN_4 46..97 CDD:405052 14/64 (22%)
PAN_AP_HGF 131..210 CDD:238532 18/112 (16%)
PAN_1 236..327 CDD:394981 27/130 (21%)
ZP 382..598 CDD:214579 7/28 (25%)
MATN4NP_001380459.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

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