DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tyn and mey

DIOPT Version :9

Sequence 1:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001287622.1 Gene:mey / 43715 FlyBaseID:FBgn0039851 Length:774 Species:Drosophila melanogaster


Alignment Length:676 Identity:176/676 - (26%)
Similarity:268/676 - (39%) Gaps:153/676 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PEQINARMAFEKLTDF----------DFPGNTYYSVKNLSLYECQGWCREEADCQAAAFSFVVNP 85
            |:.|    .||.:|.:          ..||       .|.|.:|...|:....|.|..:      
  Fly   141 PDMI----GFELITGYVLSAPSKQLETLPG-------TLMLTDCLEACQANESCSAVNY------ 188

  Fly    86 LSPSQETHCQLQNDSSAANPSAAPQRSANMYYMIKLQLRSENV--CHRPWSFERVPNKVIRGLDN 148
                 ||...:...|:|.....:..||....:.:..|.....|  |.:.|..:||....:.....
  Fly   189 -----ETGLCVMFRSTADQLPGSLSRSQYPVFTVYAQKSCFGVRPCSKAWCIDRVQGYRLPERAK 248

  Fly   149 ALIYTSTKEACLSACLNERRFVCRSVEYDYNNMKCVLSDSDRRSSGQFVQLVDAQGTDYFENLCL 213
            |....:|:..|:..||.|..|.|||..|..::..|.|||.||.:......:....|.||.||.|.
  Fly   249 ASQSVATRRDCIELCLGETEFTCRSANYYAHSGLCELSDMDRITLSDEANIAAYDGADYLENNCA 313

  Fly   214 -KPAQACKNNRSFGNSQKMGVSEEKVAQYVGLHYYTDKELQVTSESACRLACEIESEFLCRSFLY 277
             :|::.|:..|..|...|   :.:.|.|.|          |...|  ||..| :.:.|.|.|:.|
  Fly   314 EEPSKLCEFKRVAGRILK---TVDSVHQNV----------QTLDE--CRDLC-LTAPFRCHSYDY 362

  Fly   278 LGQPQGSQYNCRLYHLDHKTLPDGPSTYLNHERPLIDHGEPIGQYFENQCEKAAGLGAGSPPGTL 342
               .:..:..|||.|....||.|....||:                   .|:||           
  Fly   363 ---NETGELVCRLSHHSRATLTDLSEPYLS-------------------IEEAA----------- 394

  Fly   343 DKIDTLPVSLDTIEDPNLTNLTRNDVNCDKTGTCYDVSVHCKDTRIAVQVRTNKPFNGRIYALGR 407
                       |.|.                ..||:||:.|:...:..::||:|.|:|::||.|.
  Fly   395 -----------TYEQ----------------SACYNVSIDCRSGEMITKIRTSKLFDGKVYAKGA 432

  Fly   408 SETCNIDVINSDAFRLDLTMAGQDCNT-QSVTGVYSNTVVLQHHSVVMTKADKIYKVKCTYDMSS 471
            .::|.::|.||..|.|.:.....:||. ||..|.|.|.:|:|||.:::|.:|....|.|.||:::
  Fly   433 PKSCAVNVNNSLEFDLKMRYNDLECNVRQSAYGRYMNDIVIQHHDMIVTSSDLGLAVSCQYDLTN 497

  Fly   472 K----NITFGM---MPIRDPEMIHINSSPEAPPPRIRILDTRQREVETVR----IGDRLNFRIEI 525
            |    |:..|:   :.....|.|.::|      |.: |:....|:...::    :||.|..|.||
  Fly   498 KTVVNNVDLGVTGEIESTLSEEIIVDS------PNV-IMKITARDGSDMKRIAEVGDPLALRFEI 555

  Fly   526 PE-DTPYGIFARSCVAMAKDARTSFKIIDDDGCPTDPTIFPGFTADGN---ALQSTYEAFRFTES 586
            .: ::||.||.|..|||.........:||.:|||||..|........|   .|.|.::||:|..|
  Fly   556 VDANSPYEIFVRELVAMDGTDSAEITLIDANGCPTDQYIMSAMQKLANNRKVLLSQFDAFKFPSS 620

  Fly   587 YGVIFQCNVKYCLGPCEPAVCE----WNMDSFESLGRRRRRSIESNDTKSEDDMNISQEILVLDF 647
            ..|.|:..|..|:..|||.:|:    ..:.|..|.|||:|..:...|         ..|:.:   
  Fly   621 ELVQFRALVTPCIPRCEPVICDNDENGELKSLLSYGRRKRSVLNGTD---------GVELAI--- 673

  Fly   648 GDEKREFFKADPSTDFAKDKTVTIIE 673
               |.|..|.|.|...|.|:.:.:::
  Fly   674 ---KSERQKRDVSHQAAGDENILLVQ 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tynNP_001027032.1 PAN_4 46..97 CDD:405052 10/60 (17%)
PAN_AP_HGF 131..210 CDD:238532 23/78 (29%)
PAN_1 236..327 CDD:394981 21/90 (23%)
ZP 382..598 CDD:214579 73/231 (32%)
meyNP_001287622.1 PAN_1 146..223 CDD:278453 18/94 (19%)
PAN_AP_HGF 233..311 CDD:238532 24/77 (31%)
PAN_AP_HGF 319..>380 CDD:238532 20/79 (25%)
ZP 408..642 CDD:214579 77/240 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440845
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JEZ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47327
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
54.840

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