DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tyn and neo

DIOPT Version :9

Sequence 1:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster


Alignment Length:729 Identity:194/729 - (26%)
Similarity:303/729 - (41%) Gaps:176/729 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EKLTDFDFPGNTYYSVKNLSLYECQGWCREEADCQAAAFSFVVNPLSPSQETH-CQLQNDSSAAN 104
            |||.|.. ||       .|.|.:|...||:...||           |.:.||. |.|.:..:...
  Fly   132 EKLMDSQ-PG-------TLMLTDCLDTCRKNKTCQ-----------SVNYETGLCVLFSAHADQL 177

  Fly   105 PSAAPQRSANMY--YMIKLQLRSENVCHRPWSFERVPNKVIRGLDNALIYTSTKEACLSACLNER 167
            |.|..:....::  |..|..| :...|.|.|..:||.|..::......:..:::..|...||.|.
  Fly   178 PGALTKSQFPVFTIYAQKSCL-AVKPCSRAWYVDRVQNYKLKTEVKRTVSVASRRECFELCLGEN 241

  Fly   168 RFVCRSVEYDYNNMKCVLSDSDR--RSSGQFVQLVDAQGTDYFENLCL-KPAQACKNNRSFGNSQ 229
            .|.|||..||..:..|.||:.||  .:..|..|:.|  |:||.||.|: :|.:.|:..|..|...
  Fly   242 DFTCRSANYDRTSGACELSELDRLTLAGSQAFQVND--GSDYLENHCVDEPNKLCEFKRLPGRIL 304

  Fly   230 KMGVSEEKVAQYVGLHYYTDKELQVTSESACRLACEIESEFLCRSFLYLGQPQGSQYN------C 288
            |   :.:.|.|            :|:|...||..| :.|.:.|.|:         .||      |
  Fly   305 K---TVDSVYQ------------EVSSIDECRELC-LNSPYRCHSY---------DYNDTGDMVC 344

  Fly   289 RLYHLDHKTLPDGPSTYLNHERPLIDHGEPIGQYFENQCEKAAGLGAGSPPGTLDKIDTLPVSLD 353
            ||.|....||.|....:|.                                              
  Fly   345 RLSHHSRATLADVQEPFLE---------------------------------------------- 363

  Fly   354 TIEDPNLTNLTRNDVNCDKTGTCYDVSVHCKDTRIAVQVRTNKPFNGRIYALGRSETCNIDVINS 418
             :.:.:...||          :||:|::.|....:..::||:|.|||::||.|..::|::||.::
  Fly   364 -VPEASTYELT----------SCYNVTIECGGGDMLARIRTSKLFNGKVYAKGSPKSCSVDVKSA 417

  Fly   419 DAFRLDLTMAGQDCNT-QSVTGVYSNTVVLQHHSVVMTKADKIYKVKCTYDMSSKNITFG----- 477
            ..|.|.:.....:||. ||..|.|.|.:::|||.:::|.:|....:.|.||:::|:::.|     
  Fly   418 LDFELRMNYHDLECNVRQSTAGRYVNDIIIQHHDMIVTSSDLGLALACQYDLTNKSVSNGVDLDV 482

  Fly   478 ---MMPIRDPEMIHINSSPEAPPPRIRILDTRQRE-VETVRIGDRLNFRIEI-PEDTPYGIFARS 537
               :||....|:|     .|:|...:||......: :.:..:||.|..:.|| .|.:||.||.|.
  Fly   483 RGDIMPALSEEVI-----VESPNVIMRITSRDGSDMMRSAEVGDPLALKFEIVDEQSPYEIFIRE 542

  Fly   538 CVAMAKDARTSFKIIDDDGCPTD----PTIFPGFTADGNALQSTYEAFRFTESYGVIFQCNVKYC 598
            .|||.....:...:||.:|||||    ..|:.| :..|..|.|.::||:|..|..|.|:..|..|
  Fly   543 LVAMDGVDNSEITLIDSNGCPTDHFIMGPIYKG-SVSGKMLLSNFDAFKFPSSEVVQFRALVTPC 606

  Fly   599 LGPCEPAVCEWNMDSFE-----SLGRRR------------RRSIESNDTKSEDDMNISQEILVLD 646
            :..|||..||....|.|     |.||:|            ||.|:::...:..||.:.|.|.:.|
  Fly   607 MPSCEPVQCEQEDTSGEFRSLLSYGRKRRSLNTTDDHPRPRRDIDTSKKSAPSDMLLVQSIQITD 671

  Fly   647 -FGDEKREFFKAD--PSTDF--AKDKTVTIIEP----CPTKTSVLALAVTCALMILLYISTL--- 699
             ||      ||.|  .|.||  ..:.|.|..|.    |   .:.:.|.....:.:|..::.:   
  Fly   672 KFG------FKQDKQESGDFYDGNETTFTANEEGHGFC---VNAIGLITAATIFLLTQLAVIAIW 727

  Fly   700 -FCYYMKKWMQPHK 712
             :||..::.:||::
  Fly   728 TYCYQRRQKLQPYQ 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tynNP_001027032.1 PAN_4 46..97 CDD:405052 13/51 (25%)
PAN_AP_HGF 131..210 CDD:238532 26/80 (33%)
PAN_1 236..327 CDD:394981 20/96 (21%)
ZP 382..598 CDD:214579 73/230 (32%)
neoNP_651733.1 PAN_1 120..197 CDD:278453 22/83 (27%)
PAN_AP_HGF 211..285 CDD:238532 25/75 (33%)
PAN_1 294..373 CDD:278453 24/150 (16%)
ZP 381..615 CDD:214579 77/239 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440846
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JEZ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47327
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
54.840

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