DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tyn and MATN3

DIOPT Version :9

Sequence 1:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_002372.1 Gene:MATN3 / 4148 HGNCID:6909 Length:486 Species:Homo sapiens


Alignment Length:356 Identity:63/356 - (17%)
Similarity:101/356 - (28%) Gaps:134/356 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 MAFEKLTDFDFPGNTYYSVKNLS----------------LYECQGWCREEADCQAAAFSFVVNPL 86
            ||.|.|.:..|...||..::.||                .::||..|..:.:             
Human   233 MASEPLEEHVFYVETYGVIEKLSSRFQETFCALDPCVLGTHQCQHVCISDGE------------- 284

  Fly    87 SPSQETHCQLQNDSSAANPSAAPQRSANMYYMIKLQLRSENVCHRPWSFERVPNKVIRGLDNALI 151
               .:.||:                                 |.:.::. ....|....||...:
Human   285 ---GKHHCE---------------------------------CSQGYTL-NADKKTCSALDRCAL 312

  Fly   152 YTSTKEACLSACLNER--RFVCRSVE-YDYNNMKCVLSDSDRRSSG----QFVQLVDAQGTDYFE 209
            .|   ..|...|:|:|  .:.|...| |..|..:...|..|:.:.|    |.:.:.|..|:.:.|
Human   313 NT---HGCEHICVNDRSGSYHCECYEGYTLNEDRKTCSAQDKCALGTHGCQHICVNDRTGSHHCE 374

  Fly   210 NLCLKPAQACKNNRSFGNSQKMGVSEEKVAQYVGLHYYTDKELQVTSESACRLACEIESEFLCRS 274
                     |....:....:|.....:|.|  :|.|             .|:..|..:.      
Human   375 ---------CYEGYTLNADKKTCSVRDKCA--LGSH-------------GCQHICVSDG------ 409

  Fly   275 FLYLGQPQGSQYNCRLYHLDHKTLPDGPSTYLNHERPLIDHGEPIGQYFENQCEKAAGLGAGSPP 339
                    .:.|:|..|          |...||.::......|...:....  |.|.|..|    
Human   410 --------AASYHCDCY----------PGYTLNEDKKTCSATEEARRLVST--EDACGCEA---- 450

  Fly   340 GTL---DKIDTLPVSLDTIEDPNLTNLTRND 367
             ||   ||:.:....|:|..|..|..|..|:
Human   451 -TLAFQDKVSSYLQRLNTKLDDILEKLKINE 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tynNP_001027032.1 PAN_4 46..97 CDD:405052 10/66 (15%)
PAN_AP_HGF 131..210 CDD:238532 18/85 (21%)
PAN_1 236..327 CDD:394981 13/90 (14%)
ZP 382..598 CDD:214579
MATN3NP_002372.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..75
vWFA 80..303 CDD:320736 15/119 (13%)
FXa_inhibition 310..346 CDD:317114 9/38 (24%)
FXa_inhibition 352..388 CDD:317114 7/44 (16%)
FXa_inhibition 394..430 CDD:317114 11/74 (15%)
Matrilin_ccoil 441..483 CDD:313592 14/47 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.