DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tyn and dy

DIOPT Version :9

Sequence 1:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_511130.2 Gene:dy / 32130 FlyBaseID:FBgn0004511 Length:699 Species:Drosophila melanogaster


Alignment Length:483 Identity:100/483 - (20%)
Similarity:173/483 - (35%) Gaps:163/483 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 HLDHKTLPDGPSTYL----NHERPLIDHGEPIG-------QYFENQCEKAAGLGAGSPPGTLDKI 345
            |..|......|:..|    ||:...:..|:|.|       |:::           |.||..|.:.
  Fly   136 HYQHNMPQPPPNVALTMRNNHQNIPLSFGQPFGPPPPPGAQFYK-----------GPPPPQLQQR 189

  Fly   346 DTLPVSL-----------------------DTIEDPNLT------------------NLTRNDVN 369
            ...|..|                       ..::.|:|:                  .:...||.
  Fly   190 PQPPPQLQLQVQPQQQQQQQQQHTQQQGQQQQVQVPDLSVGGSSNNEIWAAPVQDMPKIVSLDVK 254

  Fly   370 CDKTGTCYDVSVHCKDTRIAVQVRTNKPFNGRIYALGRSETCNIDVI------NSDAFRLDLTMA 428
            |:|.|             :.|.|:.:|||||.:::.|.....|...:      :|.:|.:.|...
  Fly   255 CEKNG-------------MKVFVQFDKPFNGIVFSKGHYSNMNCVHLPSGLGRSSASFDIGLHEC 306

  Fly   429 GQDCNTQSV----------TGV---YSNTVVLQHHSVVMTKADKIYKVKCT-YDMSSKNITFGMM 479
            |...||.:.          ||.   :.|.:|:|:...|....|:..|::|| :|...|::||...
  Fly   307 GTAGNTDNYGQGYGHEAGSTGAGTYFENIIVIQYDPQVQEVWDQARKLRCTWHDQYEKSVTFRPF 371

  Fly   480 PIRDPEM---------------IHINSSPEAPPPRIRILDTRQREVE-TVRIGDRLNFRIEI-PE 527
            |:...::               |.:...|.|            .||. .|:||..:...:.| .:
  Fly   372 PVDMLDVVRADFAGDNVGCWMQIQVGKGPWA------------SEVSGLVKIGQTMTMVLAIKDD 424

  Fly   528 DTPYGIFARSCVAMAKDARTSFKIIDDDGCPTDPTIFPGFT------ADGNALQ-STYEAFRFTE 585
            |:.:.:..|:||| ....|...:::|..||.|.|.:...||      |..:.|. :.::||:|.:
  Fly   425 DSKFDMLVRNCVA-HDGKRAPIQLVDQRGCVTRPKLMSRFTKIKNFGASASVLSYAHFQAFKFPD 488

  Fly   586 SYGVIFQCNVKYCLGPCEPAVC------------------------EWNMDSF---ESLGRRR-- 621
            |..|.|||.::.|...| |..|                        :.::|::   .::|:||  
  Fly   489 SMEVHFQCTIQICRYHC-PEQCSAETNLQDVHHLQVGPESQYGPPPQLHVDAYHVASAIGKRRDE 552

  Fly   622 RRSIESNDTKSEDDMNISQEILVLDFGD 649
            ||........:|..:.:::.|.|:..||
  Fly   553 RRVQRRARAVAEPQVGLNRIIKVVSSGD 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tynNP_001027032.1 PAN_4 46..97 CDD:405052
PAN_AP_HGF 131..210 CDD:238532
PAN_1 236..327 CDD:394981 10/45 (22%)
ZP 382..598 CDD:214579 62/259 (24%)
dyNP_511130.2 ZP 254..513 CDD:214579 69/285 (24%)
Zona_pellucida <403..510 CDD:278526 32/108 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
21.910

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