DRSC/TRiP Functional Genomics Resources

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Protein Alignment tyn and cutl-19

DIOPT Version :9

Sequence 1:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_871693.1 Gene:cutl-19 / 191090 WormBaseID:WBGene00022533 Length:237 Species:Caenorhabditis elegans


Alignment Length:223 Identity:47/223 - (21%)
Similarity:81/223 - (36%) Gaps:58/223 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   463 VKCTYD--MSSKNITFGMMPIRDPEMIHINSS--PEAPPPRIRIL------DTRQREVETVRIGD 517
            :||.|.  |:.|   .|:. :....||:.|.:  .....||.|:.      |.........::.|
 Worm    18 IKCEYSELMNQK---IGVR-VEVLNMIYENETTITSTGHPRCRLTLHKSGWDRDTCSSPQFKLND 78

  Fly   518 RLNFRIE-----IPEDTPYGIFARSCVAMAKDARTSFKIIDDDGCPTDPTIF--PGFTADGNALQ 575
            .|::...     :.:.|.|.:...||  .......|..|:.||||..:..|.  |.:|:...|..
 Worm    79 TLSWSTRVCYKWVCDTTKYAMRVESC--WIGSPNMSVYILRDDGCTIEKAILTSPVYTSFNRAAA 141

  Fly   576 STYEAFRFTESYGVIFQCNVKY------------CLGPCE----PAVCEWN-MDSFESL--GRRR 621
            ..:.|.|         |.|:||            |...|:    |..|..| .|.:|::  ...|
 Worm   142 IGWMAVR---------QKNMKYMHVGCTIRLCHLCDPKCQTITPPRTCNDNRADDYEAMWNSSSR 197

  Fly   622 RRSIESNDTKSEDDMNISQEILVLDFGD 649
            .:::...:..:.:::|       |:||:
 Worm   198 VKNLCFPEPSTTENLN-------LNFGN 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tynNP_001027032.1 PAN_4 46..97 CDD:405052
PAN_AP_HGF 131..210 CDD:238532
PAN_1 236..327 CDD:394981
ZP 382..598 CDD:214579 35/163 (21%)
cutl-19NP_871693.1 ZP <17..171 CDD:214579 36/167 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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