DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tyn and cutl-18

DIOPT Version :9

Sequence 1:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_505875.2 Gene:cutl-18 / 179565 WormBaseID:WBGene00009830 Length:801 Species:Caenorhabditis elegans


Alignment Length:852 Identity:170/852 - (19%)
Similarity:275/852 - (32%) Gaps:274/852 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 TYY-------SVKNLS-LYECQGWCREEADCQAA-AFSFVVN--PLSPSQETHCQLQNDSSAANP 105
            ||:       |:..|| :|...|       ||.. ..:|.||  ...|:..|.|  .|..:..|.
 Worm     5 TYFLSSFPLISISLLSCIYSVNG-------CQGKDTVAFFVNGDAKLPASATAC--FNSCALGNC 60

  Fly   106 SAAPQR--------SANMYYMIKLQLRSENVC-----HR----PWSFERVPNKVIRGLDNALIYT 153
            :....:        .:|.:..|:.:...|..|     ||    .|.     ::::.....:::..
 Worm    61 TGVLFQGDKCIVIDKSNYFGRIEERNYIEKKCVKKAPHRLLVKEWD-----DRILVDKSQSVLKA 120

  Fly   154 STKEACLSACLNERRFVCRSVEYDYNNMKCVLSDSDRRSSGQFVQLVDAQG--TDYFENLCLKPA 216
            .||..|||.|..|:||.|.|..:..::..|:|:.:   ||......:|..|  ..|.|...||.|
 Worm   121 ETKLECLSLCAQEKRFPCLSAMFYRDSKDCLLNSA---SSSSAKLKMDTGGFKVSYMELHGLKEA 182

  Fly   217 QACKN---------------NRSFGNSQKMGVSEEKVAQYVGLHY-------------------- 246
            ..|.|               :|.|..|..:|...||......:.|                    
 Worm   183 VHCLNAFKMVAFDAIEIRGESRIFNGSDGLGKCMEKCKDCDVVMYNEGFSECYSVWNDPSGQLLD 247

  Fly   247 YTDKELQVTS---------------------------ESACRLACEIESEFLCRSFLY------- 277
            :.:.|.|:.:                           :|.|...|.:..|  || |.|       
 Worm   248 FVNDEYQILTNACSYQKKTCNSRNSLYISYSNPDESLKSECLEKCTMSEE--CR-FAYQSKDMNN 309

  Fly   278 -------LGQPQGSQYNCRLYHLDHKTLPDGPSTYLNHERPLID--------HGEPIGQYFE-NQ 326
                   :..|..:|..|    .|...|.||.:.       |.|        :|:.|.:..| :|
 Worm   310 CLISRRRMALPMLAQKIC----ADVNDLSDGSAI-------LFDELGGCKNENGQLISKDLELHQ 363

  Fly   327 CEKAAGLGAGSPPGTLDKIDTL----------PVSLDTIEDPNLTNLTRNDVNCDK--------- 372
            |.:   |.|..|..:.:.|...          .|..|. |:.|.:..|.|.:..::         
 Worm   364 CMQ---LCATHPTRSCESISYTKSRDCYLHDGAVETDN-ENTNCSVFTLNVITFEQELKPTTIAP 424

  Fly   373 ---------------TGTCYD-------------------------VSVHCKDTRIAVQVRTNKP 397
                           ||...|                         :|..|....|:|:|....|
 Worm   425 GDSKVKKPHKAKTFSTGNKKDQKKVEERKLYVKKSSKLGSSPLDVKISTQCTFGFISVKVSPGNP 489

  Fly   398 FN-----GRIYALGRSETCNIDVINSDAFRLDLTMAGQDCNTQSVTGVYSNTVVLQH------HS 451
            .|     |.||.......|:..:.......|.:......|.|:: ..:|...||:..      ::
 Worm   490 DNHNLVGGEIYVRNGHSNCSKTIGTDGEAILKIRHNDTTCITKN-GDIYETVVVVTQNVESVGNA 553

  Fly   452 VVMTKADKIYKVKCTYDMSSKNITFG-MMPIRDPEM--IHINSSPEAPPPRIRILDTRQ-REVET 512
            .|:|..|:::||:|.|......:... .|.:|..:.  :.|.......|..:.:...|: .:..|
 Worm   554 TVITIDDQLFKVRCDYSNQKNAVAVAKTMNLRTTQFNKLDIYGKVNVKPMSMELRGKREIIKART 618

  Fly   513 VRIGDRLNFRIEIPEDT-PYGIFARSCVAMAKDARTSFKIIDDDGCPT---------DPTIFPGF 567
            |::|..|:....:...| ...:|.:.|.|..::..... |:..:||.|         |..   ..
 Worm   619 VKLGQSLDLVFTVDNSTSARHVFVKKCTAYDQNGDEKI-ILIKNGCATQHAKEYVLRDEI---KE 679

  Fly   568 TADGNALQSTYEAFRFTESYGVIFQCNVKYCLGPCEPAVCEWNMDSFESLGRRRRRSIESNDTK- 631
            ||.|..|  .:.||||.:...|..:|.|||| ..|:.|.|       .|..||.....||.||. 
 Worm   680 TATGFVL--PFRAFRFKQGEAVKIECEVKYC-EKCKKANC-------PSRNRRFTTFDESEDTTL 734

  Fly   632 --SEDDMNISQEILVLDFGDEKREFFKADPSTD-----FAKDKTVTIIEPCPTKTSVLALAVTCA 689
              :||...:..|:||....|          ||.     ...::.:.:|       |:..:.::..
 Worm   735 TGNEDTEKVHAELLVQTIVD----------STQLDGYCLQLNRWIALI-------SLTVIIISIQ 782

  Fly   690 LMILLYI 696
            .::::||
 Worm   783 FLLVIYI 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tynNP_001027032.1 PAN_4 46..97 CDD:405052 15/55 (27%)
PAN_AP_HGF 131..210 CDD:238532 20/84 (24%)
PAN_1 236..327 CDD:394981 25/160 (16%)
ZP 382..598 CDD:214579 53/240 (22%)
cutl-18NP_505875.2 PAN_AP_HGF 105..177 CDD:238532 20/79 (25%)
PAN_AP 187..258 CDD:214680 10/70 (14%)
ZP 474..719 CDD:214579 58/259 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR47327
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.970

Return to query results.
Submit another query.